RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SARGQ9BW04 601 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR2J1Q9GZK6 312 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DCAF13Q9NV06 445 aaKnown RBP12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC5A6Q9Y289 635 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM212A6NML5 194 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRKNO60260 465 aaPredicted RBP12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DCAF7P61962 342 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PM20D1Q6GTS8 502 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OLIG3Q7RTU3 272 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMIGD2Q96BF3 282 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 KIRREL1Q96J84 757 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZCCHC4Q9H5U6 513 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 H0Y8X5 98 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR7C2O60412 319 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 UPK1BO75841 260 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C17orf99Q6UX52 265 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RAB18Q9NP72 206 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SOX15O60248 233 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TGIF2LYQ8IUE0 185 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC7A6Q92536 515 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PPT2Q9UMR5 302 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NUP98P52948 1817 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CYR61O00622 381 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C1SP09871 688 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CPEP16870 476 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRLHRP49683 370 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PSMB3P49720 205 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC7A13Q8TCU3 470 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GPR173Q9NS66 373 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SERINC4A6NH21 518 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GPR37O15354 613 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLRG1O43660 514 aaKnown RBP12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 WDR1O75083 606 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GASTP01350 101 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ITGAMP11215 1152 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GABARAPL2P60520 117 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RIPPLY1Q0D2K3 151 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MOB3AQ96BX8 217 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TAS2R5Q9NYW4 299 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SIRPB1O00241 398 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RNF224P0DH78 156 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 WNT7BP56706 349 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MS4A2Q01362 244 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RAB40BQ12829 278 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SPNS3Q6ZMD2 512 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ANGPTL5Q86XS5 388 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MEIKINA0A087WXM9 373 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GLRA1P23415 457 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RAB38P57729 211 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GPLD1P80108 840 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ELP4Q96EB1 424 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC16A6O15403 523 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HCRTR1O43613 425 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR13C7P0DN81 318 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MYF5P13349 255 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RANBP10Q6VN20 620 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FBXL6Q8N531 539 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC30A3Q99726 388 aa12.17□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HPNP05981 417 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SFTPA2Q8IWL1 248 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SFTPA1Q8IWL2 248 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CGGBP1Q9UFW8 167 aaPredicted RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GPR12P47775 334 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DLX5P56178 289 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DOC2BQ14184 412 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LRRC26Q2I0M4 334 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PATE1Q8WXA2 126 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NTNG1Q9Y2I2 539 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MCM3APO60318 1980 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FAM221AA4D161 298 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ACKR3P25106 362 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 AOAHP28039 575 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OPRD1P41143 372 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms