RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RBM4Q9BWF3 364 aaKnown RBP17.09■□□□□ 0.33
HDAC7-220ENST00000471235 OR2H1Q9GZK4 316 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 WNT5BQ9H1J7 359 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 C1orf198Q9H425 327 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 CMC2Q9NRP2 79 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 CA10Q9NS85 328 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 FAIMQ9NVQ4 179 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 OAZ3Q9UMX2 235 aa17.09■□□□□ 0.33
HDAC7-220ENST00000471235 IQCMA0A1B0GVH7 501 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 SAC3D1A6NKF1 404 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 RIIAD1A6NNX1 92 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 FAM171A2A8MVW0 826 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 MITFO75030 526 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 IFNGP01579 166 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 CD8AP01732 235 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 APEX1P27695 318 aaKnown RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 PYCR1P32322 319 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 TTKP33981 857 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 PCBD1P61457 104 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 LSM6P62312 80 aaKnown RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 NKX6-1P78426 367 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 PLP2Q04941 152 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 SNTB2Q13425 540 aaKnown RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 AQP6Q13520 282 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 GINS1Q14691 196 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 ZSCAN26Q16670 478 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 MEP1BQ16820 701 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 KRT80Q6KB66 452 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 ACSM5Q6NUN0 579 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 SYT9Q86SS6 491 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 FBXL14Q8N1E6 418 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 PAQR4Q8N4S7 273 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 ICA1LQ8NDH6 482 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 CPEB3Q8NE35 698 aaKnown RBP17.08■□□□□ 0.32
HDAC7-220ENST00000471235 SLC26A10Q8NG04 563 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 OR9Q1Q8NGQ5 310 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 NMNAT2Q9BZQ4 307 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 SLC25A19Q9HC21 320 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 KRT84Q9NSB2 600 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 OTOGQ6ZRI0 2925 aa17.08■□□□□ 0.32
HDAC7-220ENST00000471235 TMCC2O75069 709 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 PTHP01270 115 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 CCL2P13500 99 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 ZNF3P17036 446 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 CDK5Q00535 292 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 GLO1Q04760 184 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 SCRN3Q0VDG4 424 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 DAG1Q14118 895 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 TESK1Q15569 626 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 TBC1D28Q2M2D7 210 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 AGAP6Q5VW22 663 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 KDM4DQ6B0I6 523 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 C11orf71Q6IPW1 123 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 ZNF774Q6NX45 483 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 VHLLQ6RSH7 139 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-220ENST00000471235 C10orf67Q8IYJ2 551 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 MUC15Q8N387 334 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 OR2T4Q8NH00 348 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 ZNRF4Q8WWF5 429 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 WACQ9BTA9 647 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 CXXC4Q9H2H0 198 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 ZNF442Q9H7R0 627 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 CDH20Q9HBT6 801 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 S100A14Q9HCY8 104 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 POLR1DQ9Y2S0 133 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 TIMM10BQ9Y5J6 103 aa17.07■□□□□ 0.32
HDAC7-220ENST00000471235 SMPD2O60906 423 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 TFP02787 698 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 NR4A1P22736 598 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 APOBEC3AP31941 199 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-220ENST00000471235 APLNRP35414 380 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 THBS4P35443 961 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 SLC25A1P53007 311 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 CRISP1P54107 249 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 ADIPOQQ15848 244 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 TMEM236Q5W0B7 351 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 PROKR2Q8NFJ6 384 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 CXorf56Q9H5V9 222 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 CBLN4Q9NTU7 201 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 ASH2LQ9UBL3 628 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 TMEFF2Q9UIK5 374 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-220ENST00000471235 LHFPL6Q9Y693 200 aa17.06■□□□□ 0.32
HDAC7-220ENST00000471235 LOC100509620A0A075B734 347 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 FAM183AA6NL82 134 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 OVOL3O00110 214 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 SURF4O15260 269 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 GPRIN2O60269 458 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 DOK2O60496 412 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 SNAP29O95721 258 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 GYPBP06028 91 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 CLUP10909 449 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 SPI1P17947 270 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 IGFBP5P24593 272 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 STOMP27105 288 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 CDKN1AP38936 164 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 PTH2RP49190 550 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 PPP2R2BQ00005 443 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 GALK2Q01415 458 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 TEKQ02763 1124 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms