RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 UBL3O95164 117 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 SNAP29O95721 258 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 BGLAPP02818 100 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 ADH4P08319 380 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MMP7P09237 267 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-209ENST00000469511 PPIAL4GP0DN37 164 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MMP9P14780 707 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 IGLL1P15814 213 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 DRD4P21917 467 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 SLC6A2P23975 617 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 HTR2AP28223 471 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 ECHS1P30084 290 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MSX2P35548 267 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-209ENST00000469511 CFHR2P36980 270 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 PMELP40967 661 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MAP2K6P52564 334 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 BIDP55957 195 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 SELENOVP59797 346 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 DNAJB13P59910 316 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TNFAIP6P98066 277 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-209ENST00000469511 PMS2P3Q13401 168 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MELKQ14680 651 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 NSUN5P1Q3KNT7 163 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 C19orf54Q5BKX5 351 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 CFAP157Q5JU67 520 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 ATAD3BQ5T9A4 648 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 LRRN1Q6UXK5 716 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 ZNF841Q6ZN19 808 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 LRRC74BQ6ZQY2 392 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 C1orf122Q6ZSJ8 110 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-209ENST00000469511 C10orf107Q8IVU9 208 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 LRRC18Q8N456 261 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 PRR18Q8N4B5 295 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 SPICQ8N5J4 248 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TMEM86BQ8N661 226 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 OR4K5Q8NGD3 323 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 OR6N1Q8NGY5 312 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 OR52P1PQ8NH57 321 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 AKR7LQ8NHP1 331 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 C10orf82Q8WW14 230 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TMEM54Q969K7 222 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 SLC41A3Q96GZ6 507 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 POM121L2Q96KW2 1035 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 LRR1Q96L50 414 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 NAPGQ99747 312 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-209ENST00000469511 RHOXF2Q9BQY4 288 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 WFDC6Q9BQY6 131 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TMEM246Q9BRR3 403 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 ADI1Q9BV57 179 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 MECRQ9BV79 373 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 RNF121Q9H920 327 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 POLE3Q9NRF9 147 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TMEM38BQ9NVV0 291 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TBK1Q9UHD2 729 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 TMED5Q9Y3A6 229 aa4.35□□□□□ -1.71
PTPN4-209ENST00000469511 IGKV1D-43A0A0B4J1Z2 117 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 LOC102725191A0A1B0GVB3 256 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 A0A1W2PRD5 423 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 A0A1W2PRF3 423 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 A0A1W2PRM7 423 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 ZNF726A6NNF4 738 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 TMEM114B3SHH9 223 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 NPIPB6E9PJ23 425 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 RNASET2O00584 256 aaKnown RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CD55P08174 381 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 FGF4P08620 206 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 NEFHP12036 1026 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CPA3P15088 417 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 RPS2P15880 293 aaKnown RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 NCF2P19878 526 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PRPS1L1P21108 318 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 UQCRC2P22695 453 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PAX6P26367 422 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CDAP32320 146 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 RPL3P39023 403 aaKnown RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CSNK1A1P48729 337 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CLDN8P56748 225 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 SLC3A1Q07837 685 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 COX10Q12887 443 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PSG7Q13046 419 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 CASP8Q14790 479 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PCLAFQ15004 111 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 HERPUD1Q15011 391 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 TBC1D28Q2M2D7 210 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 ZNF718Q3SXZ3 478 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 ZMAT1Q5H9K5 638 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PABPC1L2AQ5JQF8 200 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 SPANXN4Q5MJ08 99 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 GPR157Q5UAW9 335 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 FAM205BPQ63HN1 556 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 SLC27A4Q6P1M0 643 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 BTNL3Q6UXE8 466 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 RNF165Q6ZSG1 346 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PIWIL3Q7Z3Z3 882 aaKnown RBP4.34□□□□□ -1.71
PTPN4-209ENST00000469511 FGFRL1Q8N441 504 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 PNKDQ8N490 385 aa4.34□□□□□ -1.71
PTPN4-209ENST00000469511 FNDC5Q8NAU1 212 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms