RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 MMACHCQ9Y4U1 282 aa8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 PCYT1BQ9Y5K3 369 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-207ENST00000469334 YLPM1P49750 1951 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MEIS3P1A6NDR6 274 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 M0R143 59 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 RAB27BO00194 218 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 EREGO14944 169 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SMAD9O15198 467 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 JTBO76095 146 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CORO1AP31146 461 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PSEN2P49810 448 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ADAM8P78325 824 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MRPS6P82932 125 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 RAB11BQ15907 218 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 DCAF10Q5QP82 559 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OPN5Q6U736 354 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 GRASPQ7Z6J2 395 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF595Q8IYB9 648 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 LRRC18Q8N456 261 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CYB561A3Q8NBI2 242 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OR13C2Q8NGS9 318 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OR9A1PQ8NGU1 263 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 FGF13Q92913 245 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CCDC74AQ96AQ1 378 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 BPIFA2Q96DR5 249 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 WDR92Q96MX6 357 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CCNL2Q96S94 520 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 TMEM106CQ9BVX2 250 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ELP3Q9H9T3 547 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PELI2Q9HAT8 420 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 RAB18Q9NP72 206 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 FAM212BQ9NTI7 297 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MED31Q9Y3C7 131 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 UTRNP46939 3433 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 COL4A3Q01955 1670 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 C17orf102A2RUQ5 167 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 HSPB2A8KAH6 182 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC17A2O00624 439 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CYTIPO60759 359 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 GPANK1O95872 356 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 AGR2O95994 175 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 GYPBP06028 91 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PRKAR2AP13861 404 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 EDN3P14138 238 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 FABP4P15090 132 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CD200P41217 278 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 NAA10P41227 235 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OR1G1P47890 313 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 DHPSP49366 369 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PRLHRP49683 370 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 NANOS3P60323 173 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SKP1P63208 163 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MEF2AQ02078 507 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC9A5Q14940 896 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 HSPB2Q16082 182 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SCGB2B2Q4G0G5 96 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF684Q5T5D7 378 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 FAM129CQ86XR2 697 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF584Q8IVC4 421 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 OR9K2Q8NGE7 335 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 PFN4Q8NHR9 129 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 ARMC5Q96C12 935 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 CASD1Q96PB1 797 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC6A7Q99884 636 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 C20orf24Q9BUV8 137 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 SLC25A31Q9H0C2 315 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 C5AR2Q9P296 337 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MSRAQ9UJ68 235 aa8.17□□□□□ -1.1
SMARCE1-207ENST00000469334 MSGN1A6NI15 193 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 H0YIZ8 118 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 ALOX12BO75342 701 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 STC2O76061 302 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 APBB3O95704 486 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 SNAI1O95863 264 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 GCGP01275 180 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 RPS2P15880 293 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 TBPP20226 339 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 CXCR1P25024 350 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 ZNF136P52737 540 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 EFNB2P52799 333 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 SUCLG1P53597 346 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 PRKAG1P54619 331 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 RAC1P63000 192 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 VGLL4Q14135 290 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 AGERQ15109 404 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 PRAMEF14Q5SWL7 426 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 LANCL3Q6ZV70 420 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 KCTD9Q7L273 389 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 ARL14Q8N4G2 192 aa8.16□□□□□ -1.1
SMARCE1-207ENST00000469334 KREMEN2Q8NCW0 462 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms