RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 IGKV1D-17A0A075B6S4 117 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 C15orf38-AP3S2A0A0A6YYH1 394 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 A0A0U1RQS6 177 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 A0A1W2PP18 115 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 GOLGA8SH3BPF8 625 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 MGRN1O60291 552 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 CBR3O75828 277 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 OR5F1O95221 314 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 CSTAP01040 98 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 UBTFL1P0CB47 393 aaPredicted RBP2.81□□□□□ -1.96
XRN1-207ENST00000468894 PRPS2P11908 318 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 PSMC3P17980 439 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 TUBG1P23258 451 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 U2AF2P26368 475 aaKnown RBP eCLIP2.81□□□□□ -1.96
XRN1-207ENST00000468894 NUP62P37198 522 aaPredicted RBP2.81□□□□□ -1.96
XRN1-207ENST00000468894 DSTNP60981 165 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 DR1Q01658 176 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 KDSRQ06136 332 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 NCF4Q15080 339 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 PDK3Q15120 406 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 PON3Q15166 354 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 C8orf74Q6P047 294 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 ERICH5Q6P6B1 374 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 ZNF836Q6ZNA1 936 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 NCCRP1Q6ZVX7 275 aaPredicted RBP2.81□□□□□ -1.96
XRN1-207ENST00000468894 TRPV1Q8NER1 839 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 SYNPRQ8TBG9 265 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 KIAA1143Q96AT1 154 aaPredicted RBP2.81□□□□□ -1.96
XRN1-207ENST00000468894 PDXPQ96GD0 296 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 RARRES2Q99969 163 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 AZI2Q9H6S1 392 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 EXO5Q9H790 373 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 METTL7AQ9H8H3 244 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 TUBG2Q9NRH3 451 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 TIMM22Q9Y584 194 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 CDHR2Q9BYE9 1310 aa2.81□□□□□ -1.96
XRN1-207ENST00000468894 NUP214P35658 2090 aaPredicted RBP2.81□□□□□ -1.96
XRN1-207ENST00000468894 ATP10AO60312 1499 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 KIF27Q86VH2 1401 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 SBNO1A3KN83 1393 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 LOC100506127A0A0U1RQW1 187 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 K7ERQ8 282 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 KMOO15229 486 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 AKR7A2O43488 359 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 C1orf105O95561 183 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 SERPINA3P01011 423 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 IL1BP01584 269 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 IGKV1-17P01599 117 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 IGLV3-19P01714 112 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 ZNF14P17017 642 aaPredicted RBP2.8□□□□□ -1.96
XRN1-207ENST00000468894 NPY1RP25929 384 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 HOXA6P31267 233 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 CDKN1BP46527 198 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 CYB561P49447 251 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 ACTR3P61158 418 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 SYCNQ0VAF6 134 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 SRSF5Q13243 272 aaKnown RBP2.8□□□□□ -1.96
XRN1-207ENST00000468894 PPIL2Q13356 520 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 BCL2A1Q16548 175 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 HES5Q5TA89 166 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 ZNF493Q6ZR52 646 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 OFCC1Q8IZS5 231 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 CSGALNACT2Q8N6G5 542 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 BHLHE23Q8NDY6 225 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 CLHC1Q8NHS4 586 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 PHOSPHO2Q8TCD6 241 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 ZBED3Q96IU2 234 aaPredicted RBP2.8□□□□□ -1.96
XRN1-207ENST00000468894 LINC00477Q96M19 166 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 BBS2Q9BXC9 721 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 PKIBQ9C010 78 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 HMGXB4Q9UGU5 601 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 ATPIF1Q9UII2 106 aa2.8□□□□□ -1.96
XRN1-207ENST00000468894 IGLV2-18A0A075B6J9 118 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 A0A1B0GTQ1 180 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 LRRIQ3A6PVS8 624 aaPredicted RBP2.79□□□□□ -1.96
XRN1-207ENST00000468894 TRDMT1O14717 391 aaKnown RBP2.79□□□□□ -1.96
XRN1-207ENST00000468894 ZNF208O43345 1280 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 CIB2O75838 187 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 RBBP9O75884 186 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 SRP72O76094 671 aaKnown RBP2.79□□□□□ -1.96
XRN1-207ENST00000468894 ERLIN2O94905 339 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 AGTP01019 485 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 RALBP11234 206 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 FOLR1P15328 257 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 CD1CP29017 333 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 ATP5C1P36542 298 aaKnown RBP2.79□□□□□ -1.96
XRN1-207ENST00000468894 PPP1R2P41236 205 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 MAGEA1P43355 309 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 PRMT2P55345 433 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 ARPC4P59998 168 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 RAP1AP62834 184 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 UBE2IP63279 158 aaKnown RBP2.79□□□□□ -1.96
XRN1-207ENST00000468894 TPM4P67936 248 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 DNAJC3Q13217 504 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 STK38Q15208 465 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 PPP1R2P3Q6NXS1 205 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 ZNF880Q6PDB4 577 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 BIVMQ86UB2 503 aa2.79□□□□□ -1.96
XRN1-207ENST00000468894 UBALD2Q8IYN6 164 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms