RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TMCC2O75069 709 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ENTPD6O75354 484 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 RAB36O95755 333 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 CLDN1O95832 211 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 SCG5P05408 212 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ENTPD1P49961 510 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 SCRN3Q0VDG4 424 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 POU4F2Q12837 409 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 MEP1BQ16820 701 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 TEX30Q5JUR7 227 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 UGT2A3Q6UWM9 527 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 THAP5Q7Z6K1 395 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ERI1Q8IV48 349 aaKnown RBP13.28□□□□□ -0.28
SNIP1-202ENST00000468040 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ACBD4Q8NC06 268 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 FAM222BQ8WU58 562 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 RNF121Q9H920 327 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF224Q9NZL3 707 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ASH2LQ9UBL3 628 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF593O00488 134 aaPredicted RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 CASKO14936 926 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 THBDP07204 575 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 MMP7P09237 267 aaPredicted RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 SPARCP09486 303 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 CBR1P16152 277 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 MYF6P23409 242 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 MTNR1AP48039 350 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 RAB1AP62820 205 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 TUBA1BP68363 451 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 TUBA4AP68366 448 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 PIGFQ07326 219 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 SNTB1Q13884 538 aaKnown RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 PCK2Q16822 640 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 MEX3BQ6ZN04 569 aaKnown RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 MDP1Q86V88 176 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 TIGD4Q8IY51 512 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 APH1BQ8WW43 257 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 CNN2Q99439 309 aaKnown RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 WDR76Q9H967 626 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 B3GNT2Q9NY97 397 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 TIMM10BQ9Y5J6 103 aa13.27□□□□□ -0.29
SNIP1-202ENST00000468040 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF503-AS2A6NEH8 195 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 WBP4O75554 376 aaKnown RBP13.26□□□□□ -0.29
SNIP1-202ENST00000468040 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 PATE4P0C8F1 98 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 EPXP11678 715 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF32P17041 273 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 ATP6V1E1P36543 226 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 SPTBN1Q01082 2364 aaKnown RBP13.26□□□□□ -0.29
SNIP1-202ENST00000468040 PLP2Q04941 152 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 CDK5R2Q13319 367 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 FLNCQ14315 2725 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 C3orf36Q3SXR2 165 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 OTPQ5XKR4 325 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 B3GLCTQ6Y288 498 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 C22orf34Q6ZV56 151 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 SLC16A9Q7RTY1 509 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 WFDC8Q8IUA0 241 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF454Q8N9F8 522 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 GJC3Q8NFK1 279 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 OR6N2Q8NGY6 317 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 CNIH3Q8TBE1 160 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 FBLIM1Q8WUP2 373 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 PSMG3-AS1Q96PY0 264 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 CRIM1Q9NZV1 1036 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
SNIP1-202ENST00000468040 AASSQ9UDR5 926 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 RPL36Q9Y3U8 105 aaKnown RBP13.26□□□□□ -0.29
SNIP1-202ENST00000468040 LHFPL6Q9Y693 200 aa13.26□□□□□ -0.29
SNIP1-202ENST00000468040 SELENOFO60613 162 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 PTHP01270 115 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 CRYGSP22914 178 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 NAA10P41227 235 aaPredicted RBP13.25□□□□□ -0.29
SNIP1-202ENST00000468040 PSG4Q00888 419 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 SLC18B1Q6NT16 456 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 ALDH16A1Q8IZ83 802 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 OR51G2Q8NGK0 314 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 MNTQ99583 582 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 OR2H1Q9GZK4 316 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 YIPF3Q9GZM5 350 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 C1orf198Q9H425 327 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 ADGRL4Q9HBW9 690 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 NOX3Q9HBY0 568 aa13.25□□□□□ -0.29
SNIP1-202ENST00000468040 KCNN3Q9UGI6 736 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms