RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 PSMD4P55036 377 aaKnown RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 NUP107P57740 925 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 LCN2P80188 198 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 ZNF33AQ06730 810 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 CDH17Q12864 832 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 ORC2Q13416 577 aaPredicted RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 COA6Q5JTJ3 125 aaKnown RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 UBE2UQ5VVX9 321 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 RSBN1Q5VWQ0 802 aaPredicted RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 SPECC1LQ69YQ0 1117 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 ZNF544Q6NX49 715 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 H2AFVQ71UI9 128 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 TGIF2LYQ8IUE0 185 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 C11orf53Q8IXP5 236 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 MYOCDQ8IZQ8 938 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 FAM58AQ8N1B3 248 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 GATSQ8NAP1 163 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 C20orf203Q8NBC4 194 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 TMEM104Q8NE00 496 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 NPBQ8NG41 125 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 CD300LFQ8TDQ1 290 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 GEMIN6Q8WXD5 167 aaKnown RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 LRRC58Q96CX6 371 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 AURKBQ96GD4 344 aaPredicted RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 RASL11BQ9BPW5 248 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 TMEM175Q9BSA9 504 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 GABARAPL3Q9BY60 117 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 DEFB129Q9H1M3 183 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 KCNJ16Q9NPI9 418 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 CTPS2Q9NRF8 586 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 YARS2Q9Y2Z4 477 aaKnown RBP2.92□□□□□ -1.94
SMC4-208ENST00000467468 KCNE3Q9Y6H6 103 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 ADGRA3Q8IWK6 1321 aa2.92□□□□□ -1.94
SMC4-208ENST00000467468 CEMIPQ8WUJ3 1361 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 A6NDN8 102 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 HIDE1A8MVS5 230 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 M0QX08 132 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 HDAC3O15379 428 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 RAD51CO43502 376 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 XRCC2O43543 280 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 HSBP1O75506 76 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 KRT16P08779 473 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 GIPP09681 153 aaPredicted RBP2.91□□□□□ -1.94
SMC4-208ENST00000467468 TACSTD2P09758 323 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 SMIM10L1P0DMW3 83 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 CFHR2P36980 270 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 GPR1P46091 355 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 HADHBP55084 474 aaKnown RBP2.91□□□□□ -1.94
SMC4-208ENST00000467468 STX17P56962 302 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 REG3AQ06141 175 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 ZBED5Q49AG3 693 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 PAGE3Q5JUK9 113 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 ANKRD22Q5VYY1 191 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 FRMPD2BQ6IN97 320 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 SLC25A25Q6KCM7 469 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 ASCL4Q6XD76 172 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 ACP7Q6ZNF0 438 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 COX15Q7KZN9 410 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 CBLN2Q8IUK8 224 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 OTUD6BQ8N6M0 293 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 SPERTQ8NA61 448 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 FBXO36Q8NEA4 188 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 OR51L1Q8NGJ5 315 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 OR13C9Q8NGT0 318 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 MCOLN3Q8TDD5 553 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 EEF1AKMT3Q96AZ1 226 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 APH1AQ96BI3 265 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 SMIM10Q96HG1 83 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 SLC35E1Q96K37 410 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 COL21A1Q96P44 957 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 GAL3ST2Q9H3Q3 398 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 CD209Q9NNX6 404 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 ZNF282Q9UDV7 671 aaPredicted RBP2.91□□□□□ -1.94
SMC4-208ENST00000467468 ST3GAL6Q9Y274 331 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 STK38LQ9Y2H1 464 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 LRRK1Q38SD2 2015 aa2.91□□□□□ -1.94
SMC4-208ENST00000467468 LOC100653049A0A140TA62 436 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 GSTTP1A0A1W2PQM5 241 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 GJE1A6NN92 205 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 XKRYO14609 159 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 RNF113AO15541 343 aaKnown RBP2.9□□□□□ -1.95
SMC4-208ENST00000467468 EMC8O43402 210 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 TNFSF13O75888 250 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 KRT34O76011 436 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 MOSP00540 346 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 OXTP01178 125 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 CRISP2P16562 243 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 PMCHP20382 165 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 ZBTB25P24278 435 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 GABRR2P28476 465 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 RBMXP38159 391 aaKnown RBP2.9□□□□□ -1.95
SMC4-208ENST00000467468 SLC26A3P40879 764 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 RFC3P40938 356 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 CAV2P51636 162 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 NCBP2P52298 156 aaKnown RBP eCLIP2.9□□□□□ -1.952e-17■■■■■ 76.5
SMC4-208ENST00000467468 LYZP61626 148 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 STK11Q15831 433 aa2.9□□□□□ -1.95
SMC4-208ENST00000467468 GABRA6Q16445 453 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms