RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 HOXD1Q9GZZ0 328 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 SLC22A4Q9H015 551 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 SDCBP2Q9H190 292 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 TPK1Q9H3S4 243 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 KIR3DX1Q9H7L2 352 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 C10orf88Q9H8K7 445 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 PANK3Q9H999 370 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 PLEKHA1Q9HB21 404 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 PARVBQ9HBI1 364 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 ABCB10Q9NRK6 738 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 SLC7A10Q9NS82 523 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 RMND1Q9NWS8 449 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 SIGLEC8Q9NYZ4 499 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 EIF3KQ9UBQ5 218 aaKnown RBP2.92□□□□□ -1.94
CCDC58-203ENST00000466854 SMPXQ9UHP9 88 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 PILRAQ9UKJ1 303 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 DDX60Q8IY21 1712 aaKnown RBP2.92□□□□□ -1.94
CCDC58-203ENST00000466854 C5orf42Q9H799 3197 aa2.92□□□□□ -1.94
CCDC58-203ENST00000466854 KMT2BQ9UMN6 2715 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SSC5DA1L4H1 1573 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TDRD15B5MCY1 1934 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 USP34Q70CQ2 3546 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CARMIL3Q8ND23 1372 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 WDFY4Q6ZS81 3184 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TRAV18A0A075B6X5 111 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TRBV9A0A0B4J1U6 114 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GNG14A0A1W2PPG7 69 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SHISA7A6NL88 538 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF729A6NN14 1252 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 A8MXK9 166 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SLC1A7O00341 560 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TNFSF11O14788 317 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TFECO14948 347 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CTNSO60931 367 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 N4BP1O75113 896 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GJB5O95377 273 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TMEM50AO95807 157 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 IFNA5P01569 189 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 IGHG3P01860 377 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 RPS17P08708 135 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 HBQ1P09105 142 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 HIST1H2AGP0C0S8 130 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TFPTP0C1Z6 253 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 PSMC3P17980 439 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TSPAN8P19075 237 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 AADACP22760 399 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 HTR2CP28335 458 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 PRDX3P30048 256 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 UGT2B10P36537 528 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 P2RY4P51582 365 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 XKP51811 444 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 EFNB2P52799 333 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 RAB10P61026 200 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 EWSR1Q01844 656 aaKnown RBP eCLIP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 VGLL4Q14135 290 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 DPYSL3Q14195 570 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GRB14Q14449 540 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SLC36A2Q495M3 483 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF776Q68DI1 518 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 OR4C11Q6IEV9 310 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 C3orf33Q6P1S2 294 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TMEM184AQ6ZMB5 413 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 FRRS1Q6ZNA5 592 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 Q7L0L9 218 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CRLF3Q8IUI8 442 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 LINC00518Q8N0U6 118 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 MDS2Q8NDY4 140 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 OR4D10Q8NGI6 311 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 OR52N1Q8NH53 320 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CXorf40AQ8TE69 158 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 PYDC1Q8WXC3 89 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TMEM37Q8WXS4 190 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 LZICQ8WZA0 190 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TFGQ92734 400 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 HIST1H2ACQ93077 130 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 RPEQ96AT9 228 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CELF6Q96J87 481 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SLC45A3Q96JT2 553 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 CXorf58Q96LI9 332 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 S1PR3Q99500 378 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 FMO2Q99518 471 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TEAD3Q99594 435 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 MAPKAP1Q9BPZ7 522 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 APOL2Q9BQE5 337 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 UTP23Q9BRU9 249 aaKnown RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 TTYH2Q9BSA4 534 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 FUNDC2Q9BWH2 189 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 LRRC2Q9BYS8 371 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 SYT4Q9H2B2 425 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 IKZF5Q9H5V7 419 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GPN2Q9H9Y4 310 aaPredicted RBP2.91□□□□□ -1.94
CCDC58-203ENST00000466854 ANKHQ9HCJ1 492 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 GPATCH2LQ9NWQ4 482 aa2.91□□□□□ -1.94
CCDC58-203ENST00000466854 NDE1Q9NXR1 346 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms