RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NDRG4Q9ULP0 352 aaKnown RBP15.25■□□□□ 0.03
CPSF4-209ENST00000465132 RAI1Q7Z5J4 1906 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-209ENST00000465132 ALPK2Q86TB3 2170 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 A0A1W2PPL8 197 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 OR6C68A6NDL8 312 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 OR5H1A6NKK0 313 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 C12orf71A8MTZ7 269 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 KIAA1324LA8MWY0 1029 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-209ENST00000465132 H7C1C5 153 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 RAD51DO75771 328 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 LYZL6O75951 148 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 ITGA5P08648 1049 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 PAX1P15863 534 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 FMO3P31513 532 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 LCN6P62502 163 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 TMED1Q13445 227 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 GABRA6Q16445 453 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 SLC36A2Q495M3 483 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 TMEM236Q5W0B7 351 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 ZNF704Q6ZNC4 412 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-209ENST00000465132 CXXC5Q7LFL8 322 aaKnown RBP15.24■□□□□ 0.03
CPSF4-209ENST00000465132 OR10H5Q8NGA6 315 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 NSMAFQ92636 917 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 PITX2Q99697 317 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 ACTR6Q9GZN1 396 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 Q9H521 79 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 TMEM38BQ9NVV0 291 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 B9D1Q9UPM9 204 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 HSPE1-MOB4S4R3N1 261 aa15.24■□□□□ 0.03
CPSF4-209ENST00000465132 JMJD1CQ15652 2540 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 DSCAMO60469 2012 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 TLX2O43763 284 aaPredicted RBP15.23■□□□□ 0.03
CPSF4-209ENST00000465132 UBL3O95164 117 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 SLC2A10O95528 541 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 HLA-DQA2P01906 255 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 MSR1P21757 451 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 EDNRAP25101 427 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 CAPGP40121 348 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 SNRPGP62308 76 aaKnown RBP15.23■□□□□ 0.03
CPSF4-209ENST00000465132 LSM6P62312 80 aaKnown RBP15.23■□□□□ 0.03
CPSF4-209ENST00000465132 FMODQ06828 376 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 SGCAQ16586 387 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 PHYHD1Q5SRE7 291 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 ZNF362Q5T0B9 420 aaPredicted RBP15.23■□□□□ 0.03
CPSF4-209ENST00000465132 FAM27BQ5VT28 67 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 NXNL2Q5VZ03 156 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 SLC22A24Q8N4F4 322 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 TCEANCQ8N8B7 351 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 TMEM171Q8WVE6 324 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 MBOAT4Q96T53 435 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 MDFIQ99750 246 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 ADI1Q9BV57 179 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 NMNAT2Q9BZQ4 307 aa15.23■□□□□ 0.03
CPSF4-209ENST00000465132 ZNF701Q9NV72 531 aaPredicted RBP15.23■□□□□ 0.03
CPSF4-209ENST00000465132 ARPC4-TTLL3A0A0A6YYG9 625 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SLC22A31A6NKX4 558 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 PLAUP00749 431 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 PTHP01270 115 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CTLA4P16410 223 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 ZNF823P16415 610 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SPI1P17947 270 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 ARR3P36575 388 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 POLR2IP36954 125 aaKnown RBP15.22■□□□□ 0.03
CPSF4-209ENST00000465132 NR1H2P55055 460 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 RPS7P62081 194 aaKnown RBP15.22■□□□□ 0.03
CPSF4-209ENST00000465132 HSF2Q03933 536 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 TBRG1Q3YBR2 411 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SLC25A30Q5SVS4 291 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 C9orf135Q5VTT2 229 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 TMEM53Q6P2H8 277 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 PLBD1Q6P4A8 553 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 FOXL2NBQ6ZUU3 175 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SLC16A14Q7RTX9 510 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SYT9Q86SS6 491 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CPOQ8IVL8 374 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 OR6V1Q8N148 313 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CYB561A3Q8NBI2 242 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 BCL2L2Q92843 193 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-209ENST00000465132 S100PBPQ96BU1 408 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 MYCBPQ99417 103 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-209ENST00000465132 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CDADC1Q9BWV3 514 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CCNB1IP1Q9NPC3 277 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 SLC17A5Q9NRA2 495 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 CLN6Q9NWW5 311 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.22■□□□□ 0.03
CPSF4-209ENST00000465132 POLR1DQ9Y2S0 133 aa15.22■□□□□ 0.03
CPSF4-209ENST00000465132 HIVEP2P31629 2446 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 GLCEO94923 617 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 CST2P09228 141 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 B4GALT1P15291 398 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 EPHA2P29317 976 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 CAPZA2P47755 286 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 PLP2Q04941 152 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 PPA1Q15181 289 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 KCNMB1Q16558 191 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 KLHL12Q53G59 568 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 IZUMO2Q6UXV1 221 aa15.21■□□□□ 0.03
CPSF4-209ENST00000465132 LINGO2Q7L985 606 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms