RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 CMTM6Q9NX76 183 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 AP3M1Q9Y2T2 418 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 UGT2A1Q9Y4X1 527 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 SNX13Q9Y5W8 968 aa11.78□□□□□ -0.52
RPP40-203ENST00000464646 LOC100509620A0A075B734 347 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 LOC105371242A0A075B767 164 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 C12orf71A8MTZ7 269 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 RP2O75695 350 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 ABHD16AO95870 558 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 PNPP00491 289 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 SERPINA1P01009 418 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 IGF2P01344 180 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 IGHV3-13P01766 116 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 CST2P09228 141 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 COX4I1P13073 169 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 WNT5AP41221 380 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 HTR5AP47898 357 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 SLC7A2P52569 658 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 LMO4P61968 165 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 CGB2Q6NT52 195 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.77□□□□□ -0.53
RPP40-203ENST00000464646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.77□□□□□ -0.53
RPP40-203ENST00000464646 RP9Q8TA86 221 aaKnown RBP11.77□□□□□ -0.53
RPP40-203ENST00000464646 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
RPP40-203ENST00000464646 HSH2DQ96JZ2 352 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 C4orf45Q96LM5 186 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 ZNF570Q96NI8 536 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 WNT5BQ9H1J7 359 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 MSL2Q9HCI7 577 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 NKIRAS2Q9NYR9 191 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.53
RPP40-203ENST00000464646 FAM32AQ9Y421 112 aaKnown RBP11.77□□□□□ -0.53
RPP40-203ENST00000464646 A0A0G2JMP0 313 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 A0A0X1KG70 313 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 NPIPB13A6NJU9 1138 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 NPIPB4C9JG80 1138 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 PLPP2O43688 288 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 DOK2O60496 412 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 GMNNO75496 209 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 VENTXO95231 258 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 NGFP01138 241 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 NCK1P16333 377 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 GSTM3P21266 225 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 TNFSF4P23510 183 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 ZNF133P52736 654 aaPredicted RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 PRKCDQ05655 676 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 ZMAT1Q5H9K5 638 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 RFPL4BQ6ZWI9 263 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 OFCC1Q8IZS5 231 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 TEX29Q8N6K0 151 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 OR4M2Q8NGB6 313 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 MARS2Q96GW9 593 aaKnown RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 Q96M85 177 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 SEPHS2Q99611 448 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 KCTD14Q9BQ13 255 aaPredicted RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 RACGAP1Q9H0H5 632 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 CYSLTR2Q9NS75 346 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 NDRG4Q9ULP0 352 aaKnown RBP11.76□□□□□ -0.53
RPP40-203ENST00000464646 AURKCQ9UQB9 309 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
RPP40-203ENST00000464646 WNK2Q9Y3S1 2297 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 HTR3EA5X5Y0 456 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 ZSCAN5BA6NJL1 495 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 SGCEO43556 437 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 CCDC22O60826 627 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 IGHMP01871 453 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 SBK2P0C263 348 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 ADRA2CP18825 462 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 EPHA1P21709 976 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 FUT4P22083 530 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 LIPAP38571 399 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 NUDT2P50583 147 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 LCN2P80188 198 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 SCRN3Q0VDG4 424 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 ZBED5Q49AG3 693 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 MTX3Q5HYI7 312 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 OTPQ5XKR4 325 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 SLC15A3Q8IY34 581 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 RNF113BQ8IZP6 322 aaKnown RBP11.75□□□□□ -0.53
RPP40-203ENST00000464646 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
RPP40-203ENST00000464646 EFCAB1Q9HAE3 211 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 POLE4Q9NR33 117 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 PLEK2Q9NYT0 353 aa11.75□□□□□ -0.53
RPP40-203ENST00000464646 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
RPP40-203ENST00000464646 A0A087WUU8 490 aa11.74□□□□□ -0.53
RPP40-203ENST00000464646 SOCS2O14508 198 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms