RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LHX9Q9NQ69 397 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 NECAP2Q9NVZ3 263 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 BFARQ9NZS9 450 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 NUP50Q9UKX7 468 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 TMCO1Q9UM00 188 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 TRAPPC4Q9Y296 219 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 POLDIP2Q9Y2S7 368 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 SBNO1A3KN83 1393 aa3.5□□□□□ -1.85
PTCD3-205ENST00000464541 MAP3K15Q6ZN16 1313 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 TRAV6A0A075B6T7 132 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 KDELR3O43731 214 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CALUO43852 315 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-205ENST00000464541 DIRAS1O95057 198 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CCL2P13500 99 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 ABOP16442 354 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CRISP3P54108 245 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 PSMD4P55036 377 aaKnown RBP3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CDH17Q12864 832 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 GK3PQ14409 553 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 MAPRE2Q15555 327 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 PTPN20Q4JDL3 420 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CARD16Q5EG05 197 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 XKR4Q5GH76 650 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 ULK3Q6PHR2 472 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 COPS6Q7L5N1 327 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 OR9G4Q8NGQ1 327 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 ACER1Q8TDN7 264 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 EXOSC8Q96B26 276 aaKnown RBP3.49□□□□□ -1.85
PTCD3-205ENST00000464541 ASB9Q96DX5 294 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 JSRP1Q96MG2 331 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CLCC1Q96S66 551 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 RNF2Q99496 336 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 HDHD3Q9BSH5 251 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-205ENST00000464541 MFFQ9GZY8 342 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 SRMSQ9H3Y6 488 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 CSNK1G1Q9HCP0 422 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 NKIRAS1Q9NYS0 192 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF226Q9NYT6 803 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 PTTG3PQ9NZH4 202 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 KCNIP1Q9NZI2 227 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 EMC3Q9P0I2 261 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 GNPTGQ9UJJ9 305 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 MEMO1Q9Y316 297 aa3.49□□□□□ -1.85
PTCD3-205ENST00000464541 NSG1A0A0A6YYJ2 146 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 IGKV6-21A0A0C4DH24 114 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 KBTBD11-OT1A0A1B0GTJ5 212 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 LRCOL1A6NCL2 159 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 TRPC5OSA6NMA1 111 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 RGS16O15492 202 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 PRKAB2O43741 272 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 AIREO43918 545 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 UBCP0CG48 685 aaKnown RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 MYL2P10916 166 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 GNA11P29992 359 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 IFNA8P32881 189 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 NAA10P41227 235 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 DUSP3P51452 185 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 CLDN18P56856 261 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 CDK16Q00536 496 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 RAD51Q06609 339 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 KLRB1Q12918 225 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 KIAA0087Q14695 138 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OXA1LQ15070 435 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 PTGES3Q15185 160 aaKnown RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 RFX4Q33E94 735 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 C9orf135Q5VTT2 229 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 LRRC74BQ6ZQY2 392 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 TPGS1Q6ZTW0 290 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 MTERF4Q7Z6M4 381 aaKnown RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 PLCZ1Q86YW0 608 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 C12orf56Q8IXR9 622 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 C17orf78Q8N4C9 275 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OR51L1Q8NGJ5 315 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OR4A15Q8NGL6 344 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OR4A4PQ8NGN8 299 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OR1L6Q8NGR2 347 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 OR1N2Q8NGR9 330 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 PIH1D2Q8WWB5 315 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 STMN2Q93045 179 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 TOP1MTQ969P6 601 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 UBE2E3Q969T4 207 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 FAM131CQ96AQ9 280 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 C8orf44Q96CB5 159 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF317Q96PQ6 595 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 NAPGQ99747 312 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 BBS2Q9BXC9 721 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 SPZ1Q9BXG8 430 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 ACTR6Q9GZN1 396 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 RAB1BQ9H0U4 201 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 LY9Q9HBG7 655 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 ZC4H2Q9NQZ6 224 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 THUMPD1Q9NXG2 353 aaKnown RBP3.48□□□□□ -1.85
PTCD3-205ENST00000464541 CLN8Q9UBY8 286 aa3.48□□□□□ -1.85
PTCD3-205ENST00000464541 MROH7-TTC4A0A0A0MT08 1334 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 A0A0G2JLM5 398 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 IQANK1A0A1B0GTG1 560 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 A0A1W2PPE3 182 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 TMEM120BA0PK00 339 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 TEX46H3BTG2 121 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 AIM2O14862 343 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms