RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 AHSPQ9NZD4 102 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MTCH1Q9NZJ7 389 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MYEF2Q9P2K5 600 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 DUX4Q9UBX2 424 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 NEU3Q9UQ49 428 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 F11RQ9Y624 299 aaKnown RBP2.16□□□□□ -2.06
VCL-203ENST00000461383 LTBP1Q14766 1721 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MAP3K15Q6ZN16 1313 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 MAPK8IP3Q9UPT6 1336 aa2.16□□□□□ -2.06
VCL-203ENST00000461383 PLEKHG2Q9H7P9 1386 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 TRBV6-6A0A0A6YYG2 114 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 PINLYPA6NC86 204 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 AKR7A2O43488 359 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 CDC40O60508 579 aaKnown RBP eCLIP2.15□□□□□ -2.07
VCL-203ENST00000461383 GABARAPO95166 117 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 PCCAP05165 728 aaPredicted RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 RETP07949 1114 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 DNAH10OSP0CZ25 163 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 ADRB3P13945 408 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 GGT1P19440 569 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 RAB3BP20337 219 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 WARSP23381 471 aaKnown RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 CEACAM6P40199 344 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 CCR6P51684 374 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 MXD1Q05195 221 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 CKAP4Q07065 602 aaKnown RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 PON3Q15166 354 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 PGGHGQ32M88 737 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 HES5Q5TA89 166 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 STUMQ69YW2 141 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 TEX43Q6ZNM6 134 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 MRPL55Q7Z7F7 128 aaKnown RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 PRSS58Q8IYP2 241 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 PQLC3Q8N755 202 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 Q8N7P7 452 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 NUBPLQ8TB37 319 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 LKAAEAR1Q8TD35 194 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 GPX8Q8TED1 209 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 CA5BP1Q8WTZ4 195 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 LRRC29Q8WV35 223 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 APH1BQ8WW43 257 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 TMEM230Q96A57 120 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 ISG20Q96AZ6 181 aaKnown RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
VCL-203ENST00000461383 CREB3L1Q96BA8 519 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 RNF185Q96GF1 192 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 TAAR1Q96RJ0 339 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 SLC25A2Q9BXI2 301 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 SLC7A5P2Q9GIP4 190 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 BLZF1Q9H2G9 400 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 LYRM4Q9HD34 91 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 ZC4H2Q9NQZ6 224 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 NYAP2Q9P242 653 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 UVRAGQ9P2Y5 699 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 ST3GAL6Q9Y274 331 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 TP53TG5Q9Y2B4 290 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 LRP4O75096 1905 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 UBN2Q6ZU65 1347 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 PHLPP2Q6ZVD8 1323 aa2.15□□□□□ -2.07
VCL-203ENST00000461383 IGLV11-55A0A075B6I3 123 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 KCNE1BA0A087WTH5 132 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 TMEM120BA0PK00 339 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 SMKR1H3BMG3 65 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 TMX2-CTNND1H3BSU7 103 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 SCAMP2O15127 329 aaKnown RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 RAD51CO43502 376 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CD5LO43866 347 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 SS18L1O75177 396 aaPredicted RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 FCN3O75636 299 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 HLA-HP01893 362 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 HBE1P02100 147 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 IFNW1P05000 195 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 SERPINE2P07093 398 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 KRT16P08779 473 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 GNAO1P09471 354 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CLTAP09496 248 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 KRTAP1-4P0C5Y4 121 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CT45A6P0DMU7 189 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CT45A5P0DMU8 189 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CT45A7P0DMV0 189 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 OR5H8P0DN80 308 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 OR1E1P30953 314 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 HOXA9P31269 272 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 GPX4P36969 197 aaPredicted RBP2.14□□□□□ -2.07
VCL-203ENST00000461383 CEACAM3P40198 252 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 TNFSF9P41273 254 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 CDKN2BP42772 138 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 LHX2P50458 406 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 RAB7AP51149 207 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 BCAP31P51572 246 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 RAB11AP62491 216 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 RAD51Q06609 339 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 DNAJC3Q13217 504 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 MAB21L1Q13394 359 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 GGTLC2Q14390 218 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ITIH4Q14624 930 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 QPRTQ15274 297 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 RAB11BQ15907 218 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 KRT71Q3SY84 523 aa2.14□□□□□ -2.07
VCL-203ENST00000461383 ZNF658BQ4V348 819 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms