RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 C1orf94Q6P1W5 598 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 C1orf174Q8IYL3 243 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 ZNF786Q8N393 782 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 LINC00471Q8N535 108 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 FANK1Q8TC84 345 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 GNPDA2Q8TDQ7 276 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 UBASH3BQ8TF42 649 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 WNT5BQ9H1J7 359 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 SYT4Q9H2B2 425 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 SLCO1C1Q9NYB5 712 aa19.74■□□□□ 0.75
PTPN4-208ENST00000460289 STAMBPO95630 424 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 CTLA4P16410 223 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 ALDH3B1P43353 468 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 ENDOGQ14249 297 aaKnown RBP19.73■□□□□ 0.75
PTPN4-208ENST00000460289 GLB1L2Q8IW92 636 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 OR1J1Q8NGS3 322 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 ERMAPQ96PL5 475 aaPredicted RBP19.73■□□□□ 0.75
PTPN4-208ENST00000460289 OR52D1Q9H346 318 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 TPK1Q9H3S4 243 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 MAGIXQ9H6Y5 334 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 YAE1D1Q9NRH1 226 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 TAS2R1Q9NYW7 299 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 MYEF2Q9P2K5 600 aaKnown RBP19.73■□□□□ 0.75
PTPN4-208ENST00000460289 ABCA1O95477 2261 aa19.73■□□□□ 0.75
PTPN4-208ENST00000460289 IGLV3-9A0A075B6K5 115 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 LOC100509620A0A075B734 347 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 TCRBV5S2A0A599 114 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 TNFRSF11BO00300 401 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 ARPC3O15145 178 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 SCG5P05408 212 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 GIFP27352 417 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 MAGEA2P43356 314 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 SCRN3Q0VDG4 424 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 TSPAN31Q12999 210 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 GGTLC2Q14390 218 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 NKPD1Q17RQ9 610 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 ARL9Q6T311 187 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 ICA1LQ8NDH6 482 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 BCAS4Q8TDM0 211 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 TRIM15Q9C019 465 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 RERGLQ9H628 205 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 EMC7Q9NPA0 242 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 TAAR3PQ9P1P4 343 aa19.72■□□□□ 0.75
PTPN4-208ENST00000460289 NDRG4Q9ULP0 352 aaKnown RBP19.72■□□□□ 0.75
PTPN4-208ENST00000460289 COA3Q9Y2R0 106 aaPredicted RBP19.72■□□□□ 0.75
PTPN4-208ENST00000460289 NAV3Q8IVL0 2385 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 PPP1R3DO95685 299 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 CLPTM1O96005 669 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 COX5BP10606 129 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 CRABP1P29762 137 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 CDKN2AP42771 156 aaKnown RBP19.71■□□□□ 0.75
PTPN4-208ENST00000460289 GSSP48637 474 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 ERVS71-1P61550 626 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 LSM6P62312 80 aaKnown RBP19.71■□□□□ 0.75
PTPN4-208ENST00000460289 MS4A2Q01362 244 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 MAD2L1BPQ15013 274 aaPredicted RBP19.71■□□□□ 0.75
PTPN4-208ENST00000460289 FAM98BQ52LJ0 330 aaKnown RBP19.71■□□□□ 0.75
PTPN4-208ENST00000460289 CYB5R2Q6BCY4 276 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 ZNF774Q6NX45 483 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 DNM1P34Q6PK57 102 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 UGT2A3Q6UWM9 527 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 PTCHD4Q6ZW05 846 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 SNX33Q8WV41 574 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 ASB9Q96DX5 294 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 IFT27Q9BW83 186 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 NUAK2Q9H093 628 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 LYVE1Q9Y5Y7 322 aa19.71■□□□□ 0.75
PTPN4-208ENST00000460289 IDH3BO43837 385 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 MT-ND5P03915 603 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 NAT2P11245 290 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 NOS3P29474 1203 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 GCH1P30793 250 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 ZNF718Q3SXZ3 478 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 PGBD2Q6P3X8 592 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 TRPM8Q7Z2W7 1104 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 JAZF1Q86VZ6 243 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 SAMD8Q96LT4 415 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 LRGUKQ96M69 825 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 SNX18Q96RF0 628 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 BPESC1Q9GZL8 116 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 ELOVL3Q9HB03 270 aa19.7■□□□□ 0.74
PTPN4-208ENST00000460289 A8MV72 311 aaPredicted RBP19.69■□□□□ 0.74
PTPN4-208ENST00000460289 ICMTO60725 284 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 CRLF1O75462 422 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 RENP00797 406 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 IGHV3-13P01766 116 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 WNT5AP41221 380 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 GZMKP49863 264 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 ARHGDIAP52565 204 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 AQP6Q13520 282 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 RPL13AP3Q6NVV1 102 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 TMEM154Q6P9G4 183 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 ZNF101Q8IZC7 436 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 C4orf45Q96LM5 186 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 HINT3Q9NQE9 182 aaKnown RBP19.69■□□□□ 0.74
PTPN4-208ENST00000460289 RTTNQ86VV8 2226 aa19.69■□□□□ 0.74
PTPN4-208ENST00000460289 SGCEO43556 437 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 CCNB2O95067 398 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 KCNMB1Q16558 191 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 PCGF3Q3KNV8 242 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms