RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MST1P26927 711 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SERPINF1P36955 418 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SOX3P41225 446 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SNRPGP62308 76 aaKnown RBP9.36□□□□□ -0.91
HERC4-207ENST00000460168 FAM69AQ5T7M9 428 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 PPP1R32Q7Z5V6 425 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 ATG4DQ86TL0 474 aaPredicted RBP9.36□□□□□ -0.91
HERC4-207ENST00000460168 CLDN22Q8N7P3 220 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 OR10G3Q8NGC4 313 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 OR13C2Q8NGS9 318 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 HGDQ93099 445 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 S100PBPQ96BU1 408 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SAMD8Q96LT4 415 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SORCS2Q96PQ0 1159 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 KLHDC3Q9BQ90 382 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 GPR87Q9BY21 358 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 POLDIP3Q9BY77 421 aaKnown RBP9.36□□□□□ -0.91
HERC4-207ENST00000460168 GSX2Q9BZM3 304 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SLIRPQ9GZT3 109 aaKnown RBP9.36□□□□□ -0.91
HERC4-207ENST00000460168 DUSP21Q9H596 190 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 HEXA-AS1Q9H8Q6 139 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SLC25A19Q9HC21 320 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 SEC14L4Q9UDX3 406 aa9.36□□□□□ -0.91
HERC4-207ENST00000460168 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
HERC4-207ENST00000460168 TRAV27A0A087WT01 109 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 CLCA1A8K7I4 914 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SMAD9O15198 467 aaKnown RBP9.35□□□□□ -0.91
HERC4-207ENST00000460168 RGS10O43665 173 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 RAD1O60671 282 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ATG12O94817 140 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 RCBTB2O95199 551 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ARSBP15848 533 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ANXA7P20073 488 aaKnown RBP9.35□□□□□ -0.91
HERC4-207ENST00000460168 TGFBR2P37173 567 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ACSM1Q08AH1 577 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 TRAM1Q15629 374 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 NTRK2Q16620 822 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ACTBL2Q562R1 376 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 DNLZQ5SXM8 178 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 BICRALQ6AI39 1079 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 IL20RBQ6UXL0 311 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SHFQ7M4L6 423 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 MARCH9Q86YJ5 346 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 IL22RA1Q8N6P7 574 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 OR51A7Q8NH64 312 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 RHOVQ96L33 236 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 DNAJC27Q9NZQ0 273 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 FBXL4Q9UKA2 621 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SIGLEC7Q9Y286 467 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 KCNIP3Q9Y2W7 256 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 CDC40O60508 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
HERC4-207ENST00000460168 HCN1O60741 890 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SPDEFO95238 335 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 GP1BBP13224 206 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 PAX1P15863 534 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 CXCR1P25024 350 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ITGA3P26006 1051 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 PTGFRP43088 359 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 PITPNBP48739 271 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 OPN5Q6U736 354 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 SLC46A3Q7Z3Q1 461 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 TMPRSS12Q86WS5 348 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 TMEM156Q8N614 296 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 BRIX1Q8TDN6 353 aaKnown RBP9.35□□□□□ -0.91
HERC4-207ENST00000460168 ASB15Q8WXK1 588 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 LRR1Q96L50 414 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 CCDC32Q9BV29 185 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 HDHD2Q9H0R4 259 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 PPIL3Q9H2H8 161 aaKnown RBP9.35□□□□□ -0.91
HERC4-207ENST00000460168 CDCP1Q9H5V8 836 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 P4HTMQ9NXG6 502 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 GPR83Q9NYM4 423 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 YARS2Q9Y2Z4 477 aaKnown RBP9.35□□□□□ -0.91
HERC4-207ENST00000460168 SLC6A5Q9Y345 797 aa9.35□□□□□ -0.91
HERC4-207ENST00000460168 A0A1W2PPL8 197 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 PLSCR5A0PG75 271 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 C22orf46C9J442 243 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 TP53I11O14683 189 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 ARPC5O15511 151 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 HPGDSO60760 199 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 ENTPD6O75354 484 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 SLC25A12O75746 678 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 HPP00738 406 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 GAAP10253 952 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 SPP1P10451 314 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 DNASE1P24855 282 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 RPS19P39019 145 aaKnown RBP9.34□□□□□ -0.91
HERC4-207ENST00000460168 SSR4P51571 173 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 FXYD6P3P58550 94 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 QPRTQ15274 297 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 PGGHGQ32M88 737 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 PGAP1Q75T13 922 aa9.34□□□□□ -0.91
HERC4-207ENST00000460168 BCDIN3DQ7Z5W3 292 aaKnown RBP9.34□□□□□ -0.91
HERC4-207ENST00000460168 RPS19BP1Q86WX3 136 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms