RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 PROKR2Q8NFJ6 384 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 FGFBP3Q8TAT2 258 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 ZNRF4Q8WWF5 429 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 HSD17B8Q92506 261 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 PTP4A1Q93096 173 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 TEAD3Q99594 435 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SH3GL3Q99963 347 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 USB1Q9BQ65 265 aaKnown RBP11.39□□□□□ -0.59
VPS33A-202ENST00000451053 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SEC61A2Q9H9S3 476 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 MRPS18AQ9NVS2 196 aaKnown RBP11.39□□□□□ -0.59
VPS33A-202ENST00000451053 HAO2Q9NYQ3 351 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF224Q9NZL3 707 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 PCDHGB1Q9Y5G3 927 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SLC25A15Q9Y619 301 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 DOPEY2Q9Y3R5 2298 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 A0A087WXM4 84 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 ARPC4-TTLL3A0A0A6YYG9 625 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 TRIM64A6NGJ6 449 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 PTGES3LE9PB15 166 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 GLCEO94923 617 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 MPZL1O95297 269 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 FADS2O95864 444 aaKnown RBP11.38□□□□□ -0.59
VPS33A-202ENST00000451053 HLA-HP01893 362 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 GYPBP06028 91 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 OR8G3PP0DMU2 310 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 CLUP10909 449 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 LAP3P28838 519 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 SLC15A1P46059 708 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 CAPZA2P47755 286 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
VPS33A-202ENST00000451053 SLC35A2P78381 396 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 GGTLC2Q14390 218 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 AHSA2Q719I0 299 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 BCDIN3DQ7Z5W3 292 aaKnown RBP11.38□□□□□ -0.59
VPS33A-202ENST00000451053 STX19Q8N4C7 294 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 BBS1Q8NFJ9 593 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 OR51L1Q8NGJ5 315 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 OR6K6Q8NGW6 343 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 MUCL1Q96DR8 90 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 RNFT2Q96EX2 444 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 DACH2Q96NX9 599 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 C1QTNF6Q9BXI9 259 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 NOX3Q9HBY0 568 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 AMBNQ9NP70 447 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 EMC7Q9NPA0 242 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 POLE4Q9NR33 117 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 FKBP14Q9NWM8 211 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 NPAP1Q9NZP6 1156 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 SCOCQ9UIL1 159 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 ICE1Q9Y2F5 2266 aa11.38□□□□□ -0.59
VPS33A-202ENST00000451053 CCDC182A6NF36 153 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 SIAH2O43255 324 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 RGS10O43665 173 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 FARS2O95363 451 aaKnown RBP11.37□□□□□ -0.59
VPS33A-202ENST00000451053 RAB36O95755 333 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 PATE4P0C8F1 98 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 GAAP10253 952 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 EPXP11678 715 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-202ENST00000451053 NPR2P20594 1047 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 MSR1P21757 451 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 GSTT1P30711 240 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 GLO1Q04760 184 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 ENDOGQ14249 297 aaKnown RBP11.37□□□□□ -0.59
VPS33A-202ENST00000451053 MEP1BQ16820 701 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 NRN1LQ496H8 165 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 FAM27BQ5VT28 67 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 LYPD4Q6UWN0 246 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 GLB1L2Q8IW92 636 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 SVOPQ8N4V2 548 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 TSPAN14Q8NG11 270 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 GGHQ92820 318 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 TMEM80Q96HE8 168 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-202ENST00000451053 CNN2Q99439 309 aaKnown RBP11.37□□□□□ -0.59
VPS33A-202ENST00000451053 SIAEQ9HAT2 523 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 VCX3AQ9NNX9 186 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 LRRK2Q5S007 2527 aa11.37□□□□□ -0.59
VPS33A-202ENST00000451053 WNT11O96014 354 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 TFP02787 698 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 CDK1P06493 297 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 CD79AP11912 226 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 MYL12AP19105 171 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 CRYGSP22914 178 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 DCKP27707 260 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF83P51522 516 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ACTC1P68032 377 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ACTA1P68133 377 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms