RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 PABPC1L2AQ5JQF8 200 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 SLC35F1Q5T1Q4 408 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 HIST2H3PS2Q5TEC6 136 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 KDM4DQ6B0I6 523 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 SLC27A4Q6P1M0 643 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 HIST2H3AQ71DI3 136 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 ATG16L2Q8NAA4 619 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 SLC37A3Q8NCC5 494 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 SLC30A7Q8NEW0 376 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 TMEM171Q8WVE6 324 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 OR2H1Q9GZK4 316 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 RNF121Q9H920 327 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 SLC25A19Q9HC21 320 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 CCNB1IP1Q9NPC3 277 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 RPRD1BQ9NQG5 326 aaKnown RBP12.42□□□□□ -0.42
COL3A1-203ENST00000450867 CA10Q9NS85 328 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 ATPIF1Q9UII2 106 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 TIMM10BQ9Y5J6 103 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 ATP23Q9Y6H3 246 aa12.42□□□□□ -0.42
COL3A1-203ENST00000450867 IQCMA0A1B0GVH7 501 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 G3V2T6 193 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 H3BN98 237 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 COX5BP10606 129 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 PCSK6P29122 969 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 ART1P52961 327 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 SLC25A1P53007 311 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 HSF2Q03933 536 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 GLO1Q04760 184 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 PLP2Q04941 152 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 EFNB3Q15768 340 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 AGAP6Q5VW22 663 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 UGT2A3Q6UWM9 527 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 AMIGO2Q86SJ2 522 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 ZDHHC13Q8IUH4 622 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 MUC15Q8N387 334 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
COL3A1-203ENST00000450867 OR1J2Q8NGS2 313 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 POM121L2Q96KW2 1035 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 EMC7Q9NPA0 242 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 PAPOLBQ9NRJ5 636 aaKnown RBP12.41□□□□□ -0.42
COL3A1-203ENST00000450867 CBLN4Q9NTU7 201 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 MED13LQ71F56 2210 aa12.41□□□□□ -0.42
COL3A1-203ENST00000450867 ACANP16112 2415 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 IFNGP01579 166 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 TFP02787 698 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 ZNF23P17027 643 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 GLRXP35754 106 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 FABP6P51161 128 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 ESRRGP62508 458 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 PPP2R2BQ00005 443 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 DAG1Q14118 895 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 CRMP1Q14194 572 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 GINS1Q14691 196 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 ADIPOQQ15848 244 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 SWI5Q1ZZU3 235 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 MST1LQ2TV78 715 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 ACSM5Q6NUN0 579 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 KRTAP1-3Q8IUG1 177 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 FBXL14Q8N1E6 418 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 PAQR4Q8N4S7 273 aaPredicted RBP12.4□□□□□ -0.42
COL3A1-203ENST00000450867 CYB561A3Q8NBI2 242 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 OR2T4Q8NH00 348 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
COL3A1-203ENST00000450867 KIF17Q9P2E2 1029 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 TMEFF2Q9UIK5 374 aaPredicted RBP12.4□□□□□ -0.42
COL3A1-203ENST00000450867 KCNG2Q9UJ96 466 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 LHFPL6Q9Y693 200 aa12.4□□□□□ -0.42
COL3A1-203ENST00000450867 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 H7C417 338 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 SMPD2O60906 423 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 MPZL1O95297 269 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 HMGN1P05114 100 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 ZNF3P17036 446 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 STOMP27105 288 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 APEX1P27695 318 aaKnown RBP12.39□□□□□ -0.43
COL3A1-203ENST00000450867 APLNRP35414 380 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 THBS4P35443 961 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 PTH2RP49190 550 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 CENPAP49450 140 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 CRISP1P54107 249 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 RPS23P62266 143 aaKnown RBP12.39□□□□□ -0.43
COL3A1-203ENST00000450867 SNTB2Q13425 540 aaKnown RBP12.39□□□□□ -0.43
COL3A1-203ENST00000450867 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 IQCF1Q8N6M8 205 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 FOXN4Q96NZ1 517 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 PKP2Q99959 881 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 FN3KQ9H479 309 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 RERGLQ9H628 205 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 KRT84Q9NSB2 600 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms