RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ATRQ13535 2644 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 IGHV1-69-2A0A0G2JMI3 117 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 H7C1C5 153 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 SPRY3O43610 288 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 IGHV3-13P01766 116 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 CD14P08571 375 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 LIPAP38571 399 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 LCN6P62502 163 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 GLYATQ6IB77 296 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 SHQ1Q6PI26 577 aaKnown RBP18.75■□□□□ 0.59
CPSF7-208ENST00000450000 TMPRSS11FQ6ZWK6 438 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 LRRC75AQ8NAA5 344 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 OR51F2Q8NH61 342 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 SLC25A40Q8TBP6 338 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 WACQ9BTA9 647 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 SPAG4Q9NPE6 437 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 EGFL7Q9UHF1 273 aa18.75■□□□□ 0.59
CPSF7-208ENST00000450000 CLDN25C9JDP6 229 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 AHCYL1O43865 530 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 CRYBB2P43320 205 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 PPP1CBP62140 327 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 MVKQ03426 396 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 SCRN3Q0VDG4 424 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 SCGB2A2Q13296 93 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 ZMAT1Q5H9K5 638 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 ZNF774Q6NX45 483 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 USP51Q70EK9 711 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 CPLX4Q7Z7G2 160 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 SYT9Q86SS6 491 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 TREML1Q86YW5 311 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 TMEM186Q96B77 213 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 ELMOD3Q96FG2 381 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 C1orf159Q96HA4 380 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 FAM46AQ96IP4 442 aaKnown RBP18.74■□□□□ 0.59
CPSF7-208ENST00000450000 C4orf45Q96LM5 186 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 OR2J1Q9GZK6 312 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 WNT5BQ9H1J7 359 aa18.74■□□□□ 0.59
CPSF7-208ENST00000450000 YLPM1P49750 1951 aaKnown RBP18.73■□□□□ 0.59
CPSF7-208ENST00000450000 LOC100509620A0A075B734 347 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 NDUFB2O95178 105 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 MSMBP08118 114 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 GAAP10253 952 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 RHCEP18577 417 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 GSTM3P21266 225 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 WNT5AP41221 380 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 FAM209AQ5JX71 171 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 AVPI1Q5T686 147 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 ZER1Q7Z7L7 766 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 ZNF101Q8IZC7 436 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 KLF14Q8TD94 323 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-208ENST00000450000 IPCEF1Q8WWN9 437 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-208ENST00000450000 RAB1CQ92928 201 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 RAB39BQ96DA2 213 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 Q96M85 177 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 POLE4Q9NR33 117 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 HIF1ANQ9NWT6 349 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 CGGBP1Q9UFW8 167 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-208ENST00000450000 METRNQ9UJH8 293 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 ADAM18Q9Y3Q7 739 aa18.73■□□□□ 0.59
CPSF7-208ENST00000450000 CDC42EP2O14613 210 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 TCF21O43680 179 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 TIMM8AO60220 97 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-208ENST00000450000 RP2O75695 350 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 ABHD16AO95870 558 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 ITGA2P17301 1181 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 FUT4P22083 530 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 PRDX6P30041 224 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 HTR5AP47898 357 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 SLC3A1Q07837 685 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 MBNL2Q5VZF2 373 aaKnown RBP18.72■□□□□ 0.59
CPSF7-208ENST00000450000 GPR139Q6DWJ6 353 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 C8orf82Q6P1X6 216 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-208ENST00000450000 PEG10Q86TG7 708 aaKnown RBP18.72■□□□□ 0.59
CPSF7-208ENST00000450000 RFLNBQ8N5W9 214 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 SLC7A13Q8TCU3 470 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 CCL17Q92583 94 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 MARS2Q96GW9 593 aaKnown RBP18.72■□□□□ 0.59
CPSF7-208ENST00000450000 OCEL1Q9H607 264 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 EMC7Q9NPA0 242 aa18.72■□□□□ 0.59
CPSF7-208ENST00000450000 COL6A5A8TX70 2615 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 DNHD1Q96M86 4753 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 A0A1W2PRQ8 180 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 PRSS37A4D1T9 235 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 H3BSA7 217 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 DOK2O60496 412 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 PRSS23O95084 383 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 MPV17P39210 176 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 CENPAP49450 140 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 RPS6KA3P51812 740 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 SMIM11AP58511 58 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 KRR1Q13601 381 aaKnown RBP18.71■□□□□ 0.59
CPSF7-208ENST00000450000 DGCR6Q14129 220 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 KRTAP24-1Q3LI83 254 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 FAHD2BQ6P2I3 314 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-208ENST00000450000 FOXL2NBQ6ZUU3 175 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 TEX29Q8N6K0 151 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 MCUR1Q96AQ8 359 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 FAHD2AQ96GK7 314 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 LRRC37BQ96QE4 947 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms