RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FZR1Q9UM11 496 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 PRPF19Q9UMS4 504 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MXRA5Q9NR99 2828 aa12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 CHD3Q12873 2000 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-204ENST00000449062 MALRD1Q5VYJ5 2156 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 INAFM1C9JVW0 142 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 XKRYO14609 159 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 OR10H3O60404 316 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 SLC16A7O60669 478 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 MPZL1O95297 269 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 DAOP14920 347 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 USF1P22415 310 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 PCBD1P61457 104 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 HSF2Q03933 536 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 RIN1Q13671 783 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 MAD2L1BPQ15013 274 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 TMEM255AQ5JRV8 349 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 ADCK1Q86TW2 530 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 GNPDA2Q8TDQ7 276 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 MARS2Q96GW9 593 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 SAMD8Q96LT4 415 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 TSSK2Q96PF2 358 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 BTBD10Q9BSF8 475 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 BCL2L14Q9BZR8 327 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 LRMDAQ9H2I8 198 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 KRCC1Q9NPI7 259 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 VNN3Q9NY84 501 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 TMCC3Q9ULS5 477 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 COA3Q9Y2R0 106 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 FKBP7Q9Y680 259 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 SVEP1Q4LDE5 3571 aa12.05□□□□□ -0.48
RTFDC1-204ENST00000449062 IGLV1-36A0A0B4J1U3 117 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 A0A1W2PPL8 197 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 C12orf71A8MTZ7 269 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 M0R233 179 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 SOCS2O14508 198 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 IDH3BO43837 385 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 KHDRBS3O75525 346 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 PPP1R3DO95685 299 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 NGFP01138 241 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 GASTP01350 101 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 HPXP02790 462 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 COX5BP10606 129 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 APLNRP35414 380 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 GUCA1AP43080 201 aaPredicted RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 LSM6P62312 80 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 DBPQ10586 325 aaPredicted RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 OTPQ5XKR4 325 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 GLB1L2Q8IW92 636 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 OR6V1Q8N148 313 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 SYNPRQ8TBG9 265 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 BCAS4Q8TDM0 211 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 UBASH3BQ8TF42 649 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 C11orf40Q8WZ69 217 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 ASB9Q96DX5 294 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 ERMAPQ96PL5 475 aaPredicted RBP12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 SNX18Q96RF0 628 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 DYNLRB1Q9NP97 96 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 IL20Q9NYY1 176 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 KLHL21Q9UJP4 597 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
RTFDC1-204ENST00000449062 STAB1Q9NY15 2570 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 LYNX1G3V0Z9 82 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 TNFRSF11BO00300 401 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 TLX2O43763 284 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 LILRA1O75019 489 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 CRLF1O75462 422 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 UBOX5O94941 541 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 TP53P04637 393 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 LCKP06239 509 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 LYNX1P0DP58 116 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 COL8A2P25067 703 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 SLC6A6P31641 620 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 IFNGR2P38484 337 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 GDI2P50395 445 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 PPP1R8Q12972 351 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 ZNF620Q6ZNG0 422 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 ZBTB46Q86UZ6 589 aa12.03□□□□□ -0.48
RTFDC1-204ENST00000449062 ADGRG5Q8IZF4 528 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms