RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 GEMIN6Q8WXD5 167 aaKnown RBP13.08□□□□□ -0.32
SEC13-213ENST00000445064 DCLRE1CQ96SD1 692 aaKnown RBP13.08□□□□□ -0.32
SEC13-213ENST00000445064 SLC6A7Q99884 636 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 EGLN1Q9GZT9 426 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 CYSLTR2Q9NS75 346 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 UBAP1Q9NZ09 502 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 SNX13Q9Y5W8 968 aa13.08□□□□□ -0.32
SEC13-213ENST00000445064 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 GMNCA6NCL1 334 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 J3QLI3 93 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 IGHMP01871 453 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 ADH4P08319 380 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 LIPAP38571 399 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 COMPP49747 757 aaPredicted RBP13.07□□□□□ -0.32
SEC13-213ENST00000445064 ARFIP2P53365 341 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 PCBD1P61457 104 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 ENDOGQ14249 297 aaKnown RBP13.07□□□□□ -0.32
SEC13-213ENST00000445064 COQ5Q5HYK3 327 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 FOXL2NBQ6ZUU3 175 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 C1orf174Q8IYL3 243 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 FNDC8Q8TC99 324 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 C22orf15Q8WYQ4 148 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 PRRC1Q96M27 445 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 JMJD8Q96S16 334 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 ELOVL3Q9HB03 270 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 DCAF16Q9NXF7 216 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 OPN4Q9UHM6 478 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 ZDHHC8Q9ULC8 765 aa13.07□□□□□ -0.32
SEC13-213ENST00000445064 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 HTR3EA5X5Y0 456 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 FAM220BPB1ANY3 271 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 H7C1C5 153 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 J3KTA2 159 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 SBK2P0C263 348 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
SEC13-213ENST00000445064 IFNA8P32881 189 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 ARHGDIAP52565 204 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 LCN6P62502 163 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 TNFAIP6P98066 277 aaPredicted RBP13.06□□□□□ -0.32
SEC13-213ENST00000445064 PRKCDQ05655 676 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 PSG7Q13046 419 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 FHL1Q13642 323 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 OAFQ86UD1 273 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 TREML1Q86YW5 311 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 NRMQ8IXM6 262 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 PCYOX1LQ8NBM8 494 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 OR2T12Q8NG77 320 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 ST7LQ8TDW4 575 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 DIRC2Q96SL1 478 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 FNDC11Q9BVV2 318 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 RBM4Q9BWF3 364 aaKnown RBP13.06□□□□□ -0.32
SEC13-213ENST00000445064 SUCNR1Q9BXA5 334 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 POFUT1Q9H488 388 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 EMC7Q9NPA0 242 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 ESM1Q9NQ30 184 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 GID8Q9NWU2 228 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 GMPR2Q9P2T1 348 aaKnown RBP13.06□□□□□ -0.32
SEC13-213ENST00000445064 NPTNQ9Y639 398 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 DYSFO75923 2080 aa13.06□□□□□ -0.32
SEC13-213ENST00000445064 ARHGAP32A7KAX9 2087 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 A6NIZ1 184 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 C12orf71A8MTZ7 269 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 FFAR1O14842 300 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 SPRY1O43609 319 aaPredicted RBP13.05□□□□□ -0.32
SEC13-213ENST00000445064 TIMM8AO60220 97 aaPredicted RBP13.05□□□□□ -0.32
SEC13-213ENST00000445064 ICMTO60725 284 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 CD55P08174 381 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 EGR1P18146 543 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 MSR1P21757 451 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 GATA3P23771 443 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 RAP1BP61224 184 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 RAP1AP62834 184 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 TRAM2Q15035 370 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 ARL9Q6T311 187 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 VTCN1Q7Z7D3 282 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 BPIFB2Q8N4F0 458 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 ZDHHC22Q8N966 263 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 OR13C2Q8NGS9 318 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 VIPAS39Q9H9C1 493 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 MAN2C1Q9NTJ4 1040 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 CGGBP1Q9UFW8 167 aaPredicted RBP13.05□□□□□ -0.32
SEC13-213ENST00000445064 EGFL7Q9UHF1 273 aa13.05□□□□□ -0.32
SEC13-213ENST00000445064 A0A087WUU8 490 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 H3BSA7 217 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 PRSS23O95084 383 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 ABHD16AO95870 558 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEC13-213ENST00000445064 LIMS1P48059 325 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 CDK5R2Q13319 367 aa13.04□□□□□ -0.32
SEC13-213ENST00000445064 OTPQ5XKR4 325 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms