RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 AKR7LQ8NHP1 331 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SYNPRQ8TBG9 265 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 RASD2Q96D21 266 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SORCS2Q96PQ0 1159 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 GPA33Q99795 319 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SMR3AQ99954 134 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 PIMREGQ9BSJ6 248 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 MRPL37Q9BZE1 423 aaKnown RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 OR2H1Q9GZK4 316 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 NUAK2Q9H093 628 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SYT4Q9H2B2 425 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 REV1Q9UBZ9 1251 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 IL20RAQ9UHF4 553 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 COA3Q9Y2R0 106 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 LRBAP50851 2863 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 C5orf49A4QMS7 147 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CST1P01037 141 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 ADRA2AP08913 450 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 TUBG1P23258 451 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CDKN2AP42771 156 aaKnown RBP9.01□□□□□ -0.97
MCF2L-216ENST00000439475 COX10Q12887 443 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 AQP6Q13520 282 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CARTPTQ16568 116 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 NKPD1Q17RQ9 610 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 SLC36A3Q495N2 470 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 LEG1Q6P5S2 330 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 RASSF6Q6ZTQ3 369 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 SPATA24Q86W54 205 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CPEB3Q8NE35 698 aaKnown RBP9.01□□□□□ -0.97
MCF2L-216ENST00000439475 OR9Q2Q8NGE9 314 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 C10orf105Q8TEF2 133 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 UBASH3BQ8TF42 649 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 POM121L2Q96KW2 1035 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 SYT3Q9BQG1 590 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF416Q9BWM5 594 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CHID1Q9BWS9 393 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CDADC1Q9BWV3 514 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 TUBG2Q9NRH3 451 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 PLEK2Q9NYT0 353 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 IL20Q9NYY1 176 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 TAAR3PQ9P1P4 343 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 B9D1Q9UPM9 204 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 BAIAP2Q9UQB8 552 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 CDH10Q9Y6N8 788 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 U3KQV3 271 aa9.01□□□□□ -0.97
MCF2L-216ENST00000439475 IGHV4-30-2A0A087WSY4 118 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 DHRS12A0PJE2 317 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 ACOT8O14734 319 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 SGCEO43556 437 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 DOK2O60496 412 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 GASTP01350 101 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 DAOP14920 347 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF250P15622 560 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 HIST1H1CP16403 213 aaKnown RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 CTLA4P16410 223 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 LIPAP38571 399 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 KLF3P57682 345 aaPredicted RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 FXYD6P3P58550 94 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 GLO1Q04760 184 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 LOXL1Q08397 574 aaPredicted RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 ENDOGQ14249 297 aaKnown RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 FLOT2Q14254 428 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF774Q6NX45 483 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF620Q6ZNG0 422 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 PTCHD4Q6ZW05 846 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 Q71RC1 249 aaPredicted RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 AQP11Q8NBQ7 271 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 GJC3Q8NFK1 279 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 OR52E2Q8NGJ4 325 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 OR4C15Q8NGM1 316 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 OR4K13Q8NH42 304 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 GIPC3Q8TF64 312 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 SLC7A6OSQ96CW6 309 aaPredicted RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 C4orf45Q96LM5 186 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 COG8Q96MW5 612 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 NMNAT3Q96T66 252 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 DGCR6LQ9BY27 220 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 RACGAP1Q9H0H5 632 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 WNT5BQ9H1J7 359 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 OR51B6Q9H340 312 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 MMADHCQ9H3L0 296 aaPredicted RBP9□□□□□ -0.97
MCF2L-216ENST00000439475 EMC7Q9NPA0 242 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 FZR1Q9UM11 496 aa9□□□□□ -0.97
MCF2L-216ENST00000439475 RTTNQ86VV8 2226 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 GSC2O15499 205 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TLX2O43763 284 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 E2F6O75461 281 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ABHD16AO95870 558 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 IFNGP01579 166 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 HLA-DQA2P01906 255 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF823P16415 610 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 USF1P22415 310 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms