RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OR56B1Q8NGI3 324 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 ZBTB8AQ96BR9 441 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 LRFN5Q96NI6 719 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 SIGLEC11Q96RL6 698 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 TAS2R4Q9NYW5 299 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 TAS2R3Q9NYW6 316 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 CCDC88CQ9P219 2028 aa11.15□□□□□ -0.63
TCOF1-205ENST00000439160 BORCS7-ASMTA0A0B4J1R7 106 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 IGHA2P01877 340 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 S100A6P06703 90 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 GAAP10253 952 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 CX3CR1P49238 355 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 IL11RAQ14626 422 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 HACD4Q5VWC8 232 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 C3P1Q6ZMU1 363 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 STX12Q86Y82 276 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 BATF2Q8N1L9 274 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 C12orf45Q8N5I9 185 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-205ENST00000439160 TAAR8Q969N4 342 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF223Q9UK11 482 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-205ENST00000439160 B9D1Q9UPM9 204 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 ZFC3H1O60293 1989 aaKnown RBP11.14□□□□□ -0.63
TCOF1-205ENST00000439160 DOCK6Q96HP0 2047 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 TRABD2BA6NFA1 517 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 DLX5P56178 289 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 GLIPR1L1Q6UWM5 242 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 ARL5BQ96KC2 179 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 NEURL2Q9BR09 285 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 ENY2Q9NPA8 101 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 LSM5Q9Y4Y9 91 aaKnown RBP11.14□□□□□ -0.63
TCOF1-205ENST00000439160 PRKACBP22694 351 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 LAP3P28838 519 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 FAM76BQ5HYJ3 339 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 RHBDD2Q6NTF9 364 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 OR8D4Q8NGM9 314 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 LIPHQ8WWY8 451 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 C1QTNF6Q9BXI9 259 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 BANF2Q9H503 90 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 PIGLQ9Y2B2 252 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 RTTNQ86VV8 2226 aa11.14□□□□□ -0.63
TCOF1-205ENST00000439160 LOC100289279A0A1B0GTE1 492 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 PEX14O75381 377 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 TCRBP04435 133 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CCL4P13236 92 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 EDN3P14138 238 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 EMP3P54852 163 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CLDN15P56746 228 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 FOXL2P58012 376 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 EBPQ15125 230 aaKnown RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 OR4D9Q8NGE8 314 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF764Q96H86 408 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 FCRL1Q96LA6 429 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 S1PR5Q9H228 398 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 MYOTQ9UBF9 498 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 M0QYG6 137 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SULT1C4O75897 302 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SPDEFO95238 335 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 GRB2P62993 217 aaKnown RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ANKRD37Q7Z713 158 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF681Q96N22 645 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 OXGR1Q96P68 337 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 MICU1Q9BPX6 476 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 NICN1Q9BSH3 213 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SLCO1C1Q9NYB5 712 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 A0A096LPE4 126 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 TMEM221A6NGB7 291 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 TNFSF11O14788 317 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CBR3O75828 277 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 HOXB5P09067 269 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 RAC2P15153 192 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SSTR2P30874 369 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CAV2P51636 162 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 RPS18P62269 152 aaKnown RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SLC10A1Q14973 349 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SLC9A3R2Q15599 337 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF585AQ6P3V2 769 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 TAAR9Q96RI9 348 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 METTL17Q9H7H0 456 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-205ENST00000439160 OCIAD1Q9NX40 245 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 MLXQ9UH92 298 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CCDC187A0A096LP49 1063 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 TMEM82A0PJX8 343 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 SERPINE2P07093 398 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 EPHA1P21709 976 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 CLDN6P56747 220 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 RIPPLY1Q0D2K3 151 aa11.13□□□□□ -0.63
TCOF1-205ENST00000439160 RBMS2Q15434 407 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms