RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ITGA5P08648 1049 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 H2AFB2P0C5Z0 115 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 APEHP13798 732 aaKnown RBP8.5□□□□□ -1.05
CUX1-206ENST00000437600 SELENOPP49908 381 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 CLVS2Q5SYC1 327 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 OVCH1Q7RTY7 1134 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 GPAT4Q86UL3 456 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 PLCZ1Q86YW0 608 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 HAVCR2Q8TDQ0 301 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 NAT6Q93015 286 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 SPSB2Q99619 263 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 OR51J1Q9H342 316 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 HRASLSQ9HDD0 168 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 TAS2R10Q9NYW0 307 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 ABRACLQ9P1F3 81 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 CAMK2AQ9UQM7 478 aa8.5□□□□□ -1.05
CUX1-206ENST00000437600 EML6Q6ZMW3 1958 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 DSPP15924 2871 aaKnown RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 PRSS37A4D1T9 235 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ALG1L2C9J202 215 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 I3L521 148 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ARPC1BO15143 372 aaKnown RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 PGCP20142 388 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 RAD52P43351 418 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 PTH2RP49190 550 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 GSG1Q2KHT4 349 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 SLC35D3Q5M8T2 416 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 PRAMEF20Q5VT98 475 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 EEF1A1P5Q5VTE0 462 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 SHEQ5VZ18 495 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 CARD17Q5XLA6 110 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ZNF440Q8IYI8 595 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 TEX19Q8NA77 164 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 OR11G2Q8NGC1 345 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 MR1Q95460 341 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 S100A16Q96FQ6 103 aaKnown RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 SLC19A3Q9BZV2 496 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 GLTPQ9NZD2 209 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 NUP50Q9UKX7 468 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 EMC9Q9Y3B6 208 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 PRSS47A8MTI9 375 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 EFNA2O43921 213 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 SIX6O95475 246 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ZNF806P0C7X5 589 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 CCR9P51686 369 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 POU3F1Q03052 451 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 SPOCK1Q08629 439 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ASPHD2Q6ICH7 369 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 NDUFAF7Q7L592 441 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 MAMDC2Q7Z304 686 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 RABEPKQ7Z6M1 372 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 DND1Q8IYX4 353 aaKnown RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 CARFQ8N187 725 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 NXPE2Q96DL1 559 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 KLHL15Q96M94 604 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 GPX7Q96SL4 187 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 ABHD6Q9BV23 337 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 MRTO4Q9UKD2 239 aaKnown RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 RPH3AQ9Y2J0 694 aaPredicted RBP8.49□□□□□ -1.05
CUX1-206ENST00000437600 PCDHGA5Q9Y5G8 931 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 NBEAQ8NFP9 2946 aa8.49□□□□□ -1.05
CUX1-206ENST00000437600 TRAV36DV7A0A075B6V5 113 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 TRAV18A0A075B6X5 111 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 LOC100509620A0A075B734 347 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 TSPAN4O14817 238 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 FADS1O60427 444 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ITGA10O75578 1167 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 PDGFAP04085 211 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 IFI6P09912 130 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SLC2A1P11166 492 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 P2RX1P51575 399 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 RPL27P61353 136 aaKnown RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 MFAP5Q13361 173 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 EIF2B1Q14232 305 aaKnown RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 TCTE3Q8IZS6 198 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 OTOSQ8NHW6 89 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SPACA5Q96QH8 159 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 WDR77Q9BQA1 342 aaPredicted RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 ZCCHC4Q9H5U6 513 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 METTL17Q9H7H0 456 aaPredicted RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 FOXJ3Q9UPW0 622 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 MS4A18H0YCH9 400 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 YKT6O15498 198 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 OR2J2O76002 312 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 C1QBP02746 253 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CSN2P05814 226 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ANOS1P23352 680 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms