RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 P2RY8Q86VZ1 359 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 OR2AJ1Q8NGZ0 328 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 CNIH3Q8TBE1 160 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 FBXO17Q96EF6 278 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 INTS14Q96SY0 518 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 ZNF184Q99676 751 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-205ENST00000433439 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
CNOT9-205ENST00000433439 OR10A4Q9H209 315 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 NOX3Q9HBY0 568 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 ZNF224Q9NZL3 707 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 CRIM1Q9NZV1 1036 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 ASH2LQ9UBL3 628 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 SLC25A15Q9Y619 301 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 COMMD3-BMI1R4GMX3 469 aa13.4□□□□□ -0.26
CNOT9-205ENST00000433439 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 SLC22A31A6NKX4 558 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 UBL3O95164 117 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 RAB36O95755 333 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 CST2P09228 141 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 GABRB1P18505 474 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 COL8A1P27658 744 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 ATP6V1E1P36543 226 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 ENTPD1P49961 510 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 IDH3GP51553 393 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 MEDAGQ5VYS4 303 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 SP5Q6BEB4 398 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 DMRTC2Q8IXT2 367 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 AKR7LQ8NHP1 331 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 RHOXF1Q8NHV9 184 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 SMAP2Q8WU79 429 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-205ENST00000433439 RFKQ969G6 155 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 CNBD2Q96M20 576 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 OBP2BQ9NPH6 170 aa13.39□□□□□ -0.27
CNOT9-205ENST00000433439 UBR5O95071 2799 aaPredicted RBP13.38□□□□□ -0.27
CNOT9-205ENST00000433439 CELA3BP08861 270 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 HTR1FP30939 366 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 ARR3P36575 388 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 PEX19P40855 299 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 HCCSP53701 268 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 ISL1P61371 349 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
CNOT9-205ENST00000433439 RAB39AQ14964 217 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 KCNMB1Q16558 191 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 OCLNQ16625 522 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 SMN1Q16637 294 aaKnown RBP13.38□□□□□ -0.27
CNOT9-205ENST00000433439 PABPC1L2AQ5JQF8 200 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 SHFQ7M4L6 423 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 THAP5Q7Z6K1 395 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 OR51G2Q8NGK0 314 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 APH1BQ8WW43 257 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 Q96MT0 163 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 NPAP1Q9NZP6 1156 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 LHFPL6Q9Y693 200 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
CNOT9-205ENST00000433439 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 RER1O15258 196 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 TMCC2O75069 709 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 HRGP04196 525 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 PSKH1P11801 424 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 COX6B1P14854 86 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 CBR1P16152 277 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 PCBD1P61457 104 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 PSG4Q00888 419 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 PLP2Q04941 152 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 SCRN3Q0VDG4 424 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 AQP6Q13520 282 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 EIF2B1Q14232 305 aaKnown RBP13.37□□□□□ -0.27
CNOT9-205ENST00000433439 ZNF774Q6NX45 483 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 USP51Q70EK9 711 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 DPY19L4Q7Z388 723 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 DPPA2Q7Z7J5 298 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 BOD1Q96IK1 185 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 CNN2Q99439 309 aaKnown RBP13.37□□□□□ -0.27
CNOT9-205ENST00000433439 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 NGBQ9NPG2 151 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 B3GNT2Q9NY97 397 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 PLEK2Q9NYT0 353 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
CNOT9-205ENST00000433439 KCNG2Q9UJ96 466 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 GDF2Q9UK05 429 aaPredicted RBP13.37□□□□□ -0.27
CNOT9-205ENST00000433439 RAB26Q9ULW5 256 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNOT9-205ENST00000433439 TIMM10BQ9Y5J6 103 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 HSPE1-MOB4S4R3N1 261 aa13.37□□□□□ -0.27
CNOT9-205ENST00000433439 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
CNOT9-205ENST00000433439 SGCEO43556 437 aa13.36□□□□□ -0.27
CNOT9-205ENST00000433439 DOK2O60496 412 aa13.36□□□□□ -0.27
CNOT9-205ENST00000433439 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
CNOT9-205ENST00000433439 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
CNOT9-205ENST00000433439 EPXP11678 715 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms