RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 BTBD16Q32M84 506 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 Q5BKY6 102 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TMEM255AQ5JRV8 349 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ELFN2Q5R3F8 820 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 DCXRQ7Z4W1 244 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ZNF227Q86WZ6 799 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 LYPD6Q86Y78 171 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 SERPINA12Q8IW75 414 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ARMC10Q8N2F6 343 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 M1APQ8TC57 530 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 C5orf34Q96MH7 638 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 PROK2Q9HC23 129 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ZNF814B7Z6K7 855 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GMDSO60547 372 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 DHFRP00374 187 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ITGA5P08648 1049 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 PGA4P0DJD7 388 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 PGA3P0DJD8 388 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ZNF823P16415 610 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ACHEP22303 614 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 CCR6P51684 374 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GPR85P60893 370 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TNK1Q13470 666 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TMEM69Q5SWH9 247 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TMEM225Q6GV28 225 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ANKRD16Q6P6B7 361 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 NDUFAF7Q7L592 441 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 CDH24Q86UP0 819 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 OR10S1Q8NGN2 331 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 OR2Y1Q8NGV0 311 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 SLC25A43Q8WUT9 341 aaPredicted RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 C11orf40Q8WZ69 217 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 OR2M2Q96R28 347 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GPN3Q9UHW5 284 aaPredicted RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 RHBDD3Q9Y3P4 386 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 CIB4A0PJX0 185 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 NAP1L6A6NFF2 107 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 H3BSH0 61 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 XRCC3O43542 346 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 KLK3P07288 261 aaPredicted RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 EIF1P41567 113 aaKnown RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 MMP16P51512 607 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 FAPQ12884 760 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 MAB21L1Q13394 359 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 FCN2Q15485 313 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 DBX2Q6ZNG2 339 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 LINC00346Q8IVM7 164 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 GTPBP8Q8N3Z3 284 aaPredicted RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 C15orf40Q8WUR7 153 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 MR1Q95460 341 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 ZBTB8AQ96BR9 441 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 GTPBP2Q9BX10 602 aaKnown RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 OR52A1Q9UKL2 312 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 DHDHQ9UQ10 334 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 HDGFL3Q9Y3E1 203 aa12.44□□□□□ -0.42
HOXC4-202ENST00000430889 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
HOXC4-202ENST00000430889 COL6A3P12111 3177 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 A0A087WZY1 265 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 B4E171 279 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 ACOT7O00154 380 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 TP53I11O14683 189 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 RAD1O60671 282 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 CTAG2O75638 210 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 GP1BAP07359 652 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 ACP1P24666 158 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 FKBP2P26885 142 aaKnown RBP12.43□□□□□ -0.42
HOXC4-202ENST00000430889 DCTDP32321 178 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 TSPAN7P41732 249 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 EFNB2P52799 333 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
HOXC4-202ENST00000430889 TOMM20Q15388 145 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 THEM4Q5T1C6 240 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 CD276Q5ZPR3 534 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 SLC25A47Q6Q0C1 308 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
HOXC4-202ENST00000430889 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms