RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 PLP2Q04941 152 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 PTGES3Q15185 160 aaKnown RBP17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 OTPQ5XKR4 325 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 SYT9Q86SS6 491 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 PROKR2Q8NFJ6 384 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 TEX12Q9BXU0 123 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 OR2H1Q9GZK4 316 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 WNT5BQ9H1J7 359 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 C1orf198Q9H425 327 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 CISD1Q9NZ45 108 aaKnown RBP17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 PLEKHA6Q9Y2H5 1048 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 TIMM10BQ9Y5J6 103 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 TEX15Q9BXT5 2789 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 IQCMA0A1B0GVH7 501 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 E7EQL1 145 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 EI24O14681 340 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 BAG2O95816 211 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 PTHP01270 115 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 TFP02787 698 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 SPI1P17947 270 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 EPHA2P29317 976 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 AQP6Q13520 282 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 DAG1Q14118 895 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 MEP1BQ16820 701 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 SLC30A7Q8NEW0 376 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 OR4F15Q8NGB8 312 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 AKR7LQ8NHP1 331 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 PLEKHA8Q96JA3 519 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 USE1Q9NZ43 259 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 POLR1DQ9Y2S0 133 aa17.88■□□□□ 0.45
HMGXB4-203ENST00000420166 FAM183AA6NL82 134 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ZAR1LA6NP61 321 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ATE1O95260 518 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 HLA-DQA2P01906 255 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ALPLP05186 524 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 GYPBP06028 91 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ZNF35P13682 527 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 CD53P19397 219 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 PAICSP22234 425 aaKnown RBP17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 TEKQ02763 1124 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 HGFACQ04756 655 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 SCRN3Q0VDG4 424 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 KEAP1Q14145 624 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 CBR4Q8N4T8 237 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 CPEB3Q8NE35 698 aaKnown RBP17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 OR51L1Q8NGJ5 315 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ZNRF4Q8WWF5 429 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 NINJ1Q92982 152 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 DHRS9Q9BPW9 319 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 C9orf16Q9BUW7 83 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 HCAR1Q9BXC0 346 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 GABARAPL3Q9BY60 117 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 MED20Q9H944 212 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 ASH2LQ9UBL3 628 aa17.87■□□□□ 0.45
HMGXB4-203ENST00000420166 PRR23D1E9PI22 279 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 PRR23D2P0DMB1 279 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 CLUP10909 449 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 DNASE1P24855 282 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 APEX1P27695 318 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 ALDH3A2P51648 485 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 TBC1D28Q2M2D7 210 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 SLX4IPQ5VYV7 408 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 ZNF774Q6NX45 483 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 ALDH16A1Q8IZ83 802 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 NUP37Q8NFH4 326 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 OR10H5Q8NGA6 315 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 OR1J2Q8NGS2 313 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 SMAP2Q8WU79 429 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 PTP4A1Q93096 173 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 OTULINQ96BN8 352 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 PRRG3Q9BZD7 231 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 RIBC2Q9H4K1 309 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 CDH20Q9HBT6 801 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 HINT3Q9NQE9 182 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 MRPL22Q9NWU5 206 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 TVP23BQ9NYZ1 205 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 LHFPL6Q9Y693 200 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 ARID1AO14497 2285 aa17.86■□□□□ 0.45
HMGXB4-203ENST00000420166 MYO9AB2RTY4 2548 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 DANCRP0C864 163 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 APLNRP35414 380 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 POLR2IP36954 125 aaKnown RBP17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 RCN1Q15293 331 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 SNAPC1Q16533 368 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 USF3Q68DE3 2245 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 C12orf73Q69YU5 71 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 ZNF544Q6NX49 715 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 PLBD1Q6P4A8 553 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 LYPD4Q6UWN0 246 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 IGFBPL1Q8WX77 278 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 CCL19Q99731 98 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 FAIMQ9NVQ4 179 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 KCNG2Q9UJ96 466 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 ORC6Q9Y5N6 252 aa17.85■□□□□ 0.45
HMGXB4-203ENST00000420166 TVP23AA6NH52 213 aa17.84■□□□□ 0.45
HMGXB4-203ENST00000420166 SGCEO43556 437 aa17.84■□□□□ 0.45
HMGXB4-203ENST00000420166 DOK2O60496 412 aa17.84■□□□□ 0.45
HMGXB4-203ENST00000420166 SNAP29O95721 258 aa17.84■□□□□ 0.45
HMGXB4-203ENST00000420166 SOD3P08294 240 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms