RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PLEKHA6Q9Y2H5 1048 aa10.7□□□□□ -0.7
LIMK1-202ENST00000418310 NOP16Q9Y3C1 178 aaKnown RBP10.7□□□□□ -0.7
LIMK1-202ENST00000418310 ETV7Q9Y603 341 aa10.7□□□□□ -0.7
LIMK1-202ENST00000418310 TMEM14AQ9Y6G1 99 aa10.7□□□□□ -0.7
LIMK1-202ENST00000418310 ABCD3P28288 659 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 IGLV3-21P80748 117 aaPredicted RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 RASGEF1BQ0VAM2 473 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 MFSD13AQ14CX5 517 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 ELP2Q6IA86 826 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 CKLFQ9UBR5 152 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 FREM2Q5SZK8 3169 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 TRBV5-7A0A0A0MS05 114 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 IGKV1D-43A0A0B4J1Z2 117 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 OR2M5A3KFT3 312 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 BGLAPP02818 100 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 RLN2P04090 185 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 CSF1P09603 554 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 PPP3CBP16298 524 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 HTR2CP28335 458 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 PTGS2P35354 604 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 CSNK1EP49674 416 aaKnown RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 RPL27P61353 136 aaKnown RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 POU3F1Q03052 451 aaPredicted RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 EBPQ15125 230 aaKnown RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 TAF13Q15543 124 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 FAM69BQ5VUD6 431 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 ZNF679Q8IYX0 411 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 STPG2Q8N412 459 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 SLC46A1Q96NT5 459 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 APMAPQ9HDC9 416 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 TRAV36DV7A0A075B6V5 113 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 LOC100289279A0A1B0GTE1 492 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 DDAH2O95865 285 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 CD2P06729 351 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 NMBP08949 121 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 VAMP1P23763 118 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 NUP62P37198 522 aaPredicted RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 C1orf140Q5VVS0 124 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 GSG1LQ6UXU4 331 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 TMPRSS9Q7Z410 1059 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 TSTD1Q8NFU3 115 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 ZNF721Q8TF20 911 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 NUDCD2Q8WVJ2 157 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 ASB5Q8WWX0 329 aa10.69□□□□□ -0.7
LIMK1-202ENST00000418310 PHF3Q92576 2039 aaKnown RBP10.69□□□□□ -0.7
LIMK1-202ENST00000418310 LOC107986453A0A1B0GWG9 222 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 TMEM82A0PJX8 343 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 AHSA1O95433 338 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 ZNF823P16415 610 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 MRPS10P82664 201 aaKnown RBP10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CCINQ13939 588 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 ELOCQ15369 112 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CDNFQ49AH0 187 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 NHLRC3Q5JS37 347 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CARD17Q5XLA6 110 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 KCTD9Q7L273 389 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 SLC36A1Q7Z2H8 476 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 STEAP2Q8NFT2 490 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 RPS4Y2Q8TD47 263 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 MCHR2Q969V1 340 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 ADIPOR1Q96A54 375 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 NUP50Q9UKX7 468 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CA14Q9ULX7 337 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 APOC3P02656 99 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CD1AP06126 327 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 FOLR1P15328 257 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 PGCP20142 388 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 IGFBP4P22692 258 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 NR0B2Q15466 257 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.68□□□□□ -0.7
LIMK1-202ENST00000418310 BPIFB2Q8N4F0 458 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 SPICQ8N5J4 248 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 OR6M1Q8NGM8 313 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 OR1L3Q8NH93 324 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 MFRPQ9BY79 579 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 TWSG1Q9GZX9 223 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 MED11Q9P086 117 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 COPS7AQ9UBW8 275 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 TMEM269A0A1B0GVZ9 245 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 SLC17A2O00624 439 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CYB5AP00167 134 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 OR4E1P0C645 316 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 PRKXP51817 358 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 FBXW4P57775 412 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 EGR3Q06889 387 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 ISXQ2M1V0 245 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 GLT8D1Q68CQ7 371 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 C3orf33Q6P1S2 294 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 SEZ6L2Q6UXD5 910 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 RNF144BQ7Z419 303 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 BEST3Q8N1M1 668 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 OR4D6Q8NGJ1 314 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 FGGYQ96C11 551 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 CMTM3Q96MX0 182 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 FOXQ1Q9C009 403 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 SEC61A2Q9H9S3 476 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 PFDN2Q9UHV9 154 aa10.68□□□□□ -0.7
LIMK1-202ENST00000418310 KCNMB2Q9Y691 235 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms