RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PTCHD4Q6ZW05 846 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 MYPOPQ86VE0 399 aaPredicted RBP15.47■□□□□ 0.07
VCP-202ENST00000417448 SKA3Q8IX90 412 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 LINC01356Q8N9X3 169 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 LRTOMTQ8WZ04 291 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 NMD3Q96D46 503 aaKnown RBP15.47■□□□□ 0.07
VCP-202ENST00000417448 FOXB1Q99853 325 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 RERGLQ9H628 205 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 MYOZ1Q9NP98 299 aaPredicted RBP15.47■□□□□ 0.07
VCP-202ENST00000417448 NRIP3Q9NQ35 241 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 AP4S1Q9Y587 144 aa15.47■□□□□ 0.07
VCP-202ENST00000417448 A0A0G2JK05 382 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 TACSTD2P09758 323 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 CD79AP11912 226 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 APEX1P27695 318 aaKnown RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 CDKN2AP42771 156 aaKnown RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 CDH15P55291 814 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 SH3BGRP55822 239 aaPredicted RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 KRR1Q13601 381 aaKnown RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 SLC25A47Q6Q0C1 308 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 DPY19L2P2Q6ZN68 376 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 ZNF620Q6ZNG0 422 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 MDP1Q86V88 176 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 LRRC18Q8N456 261 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 ZNF540Q8NDQ6 660 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 MAGEE2Q8TD90 523 aaPredicted RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 FAM216AQ8WUB2 273 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 VRK1Q99986 396 aaPredicted RBP15.46■□□□□ 0.07
VCP-202ENST00000417448 SEMA6AQ9H2E6 1030 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 YY1AP1Q9H869 796 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 ARMC1Q9NVT9 282 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 ZNF224Q9NZL3 707 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 AMDHD2Q9Y303 409 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 UGT2A1Q9Y4X1 527 aa15.46■□□□□ 0.07
VCP-202ENST00000417448 SLC22A23A1A5C7 686 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 NPIPB13A6NJU9 1138 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 NPIPB4C9JG80 1138 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 TMPRSS2O15393 492 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 GPANK1O95872 356 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 SCG5P05408 212 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 GIFP27352 417 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 SLC6A6P31641 620 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 CHN2P52757 468 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 TAF11Q15544 211 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 SGCAQ16586 387 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 C17orf78Q8N4C9 275 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 SLC22A24Q8N4F4 322 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 LINC00471Q8N535 108 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 OR4K13Q8NH42 304 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 HPS1Q92902 700 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 TSSK2Q96PF2 358 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 RBP7Q96R05 134 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 SNX18Q96RF0 628 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 DGCR6LQ9BY27 220 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 FN3KQ9H479 309 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 DENND2DQ9H6A0 471 aaPredicted RBP15.45■□□□□ 0.06
VCP-202ENST00000417448 TMEM38BQ9NVV0 291 aa15.45■□□□□ 0.06
VCP-202ENST00000417448 IGHV1-18A0A0C4DH31 117 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 A0A1W2PPL8 197 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 A6NIZ1 184 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 XKRYO14609 159 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 WNT11O96014 354 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 HIST1H1CP16403 213 aaKnown RBP15.44■□□□□ 0.06
VCP-202ENST00000417448 SDHAP31040 664 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 ACTR3P61158 418 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 RAP1BP61224 184 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 SNRPD2P62316 118 aaKnown RBP15.44■□□□□ 0.06
VCP-202ENST00000417448 RAP1AP62834 184 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 NPRL3Q12980 569 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 TRIP10Q15642 601 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 RASSF6Q6ZTQ3 369 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 HDDC2Q7Z4H3 204 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 IQCF1Q8N6M8 205 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 OR4Q3Q8NH05 313 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 DUS3LQ96G46 650 aaKnown RBP15.44■□□□□ 0.06
VCP-202ENST00000417448 MS4A3Q96HJ5 214 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 GPX7Q96SL4 187 aaPredicted RBP15.44■□□□□ 0.06
VCP-202ENST00000417448 ALG12Q9BV10 488 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 TSSK6Q9BXA6 273 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 NDEL1Q9GZM8 345 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 SYT4Q9H2B2 425 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 TBC1D23Q9NUY8 699 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 REV1Q9UBZ9 1251 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 MOKQ9UQ07 419 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 CDH10Q9Y6N8 788 aa15.44■□□□□ 0.06
VCP-202ENST00000417448 ARPC4-TTLL3A0A0A6YYG9 625 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 PRSS37A4D1T9 235 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 DEAF1O75398 565 aaPredicted RBP15.43■□□□□ 0.06
VCP-202ENST00000417448 CTLA4P16410 223 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 POU1F1P28069 291 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 ZNF84P51523 738 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 IDH3GP51553 393 aaPredicted RBP15.43■□□□□ 0.06
VCP-202ENST00000417448 RPS6KA3P51812 740 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 DVL1P1P54792 670 aaPredicted RBP15.43■□□□□ 0.06
VCP-202ENST00000417448 ATP6AP1Q15904 470 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 AWAT1Q58HT5 328 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 C10orf128Q5T292 105 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 GPR139Q6DWJ6 353 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 LEG1Q6P5S2 330 aa15.43■□□□□ 0.06
VCP-202ENST00000417448 PEG10Q86TG7 708 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms