RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 C1orf189Q5VU69 101 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 LRFN4Q6PJG9 635 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 PRSS42Q7Z5A4 293 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 SLC25A44Q96H78 314 aaPredicted RBP13.23□□□□□ -0.29
LINC00475-202ENST00000416438 ZNF587Q96SQ5 575 aaPredicted RBP13.23□□□□□ -0.29
LINC00475-202ENST00000416438 CMKLR1Q99788 373 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 FBXL2Q9UKC9 423 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 MRTO4Q9UKD2 239 aaKnown RBP13.23□□□□□ -0.29
LINC00475-202ENST00000416438 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 EMC9Q9Y3B6 208 aa13.23□□□□□ -0.29
LINC00475-202ENST00000416438 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 A0A1W2PPC1 479 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 TSPAN2O60636 221 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 LIPCP11150 499 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 HTR2CP28335 458 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 FMODQ06828 376 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 ELOCQ15369 112 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 FDX2Q6P4F2 183 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 NKD1Q969G9 470 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 MS4A7Q9GZW8 240 aaPredicted RBP13.22□□□□□ -0.29
LINC00475-202ENST00000416438 FARSAQ9Y285 508 aaKnown RBP13.22□□□□□ -0.29
LINC00475-202ENST00000416438 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 TLCD2A6NGC4 264 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
LINC00475-202ENST00000416438 SPDEFO95238 335 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 RAB3DO95716 219 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 PGCP20142 388 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 ABCD3P28288 659 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 RIDAP52758 137 aaKnown RBP13.22□□□□□ -0.29
LINC00475-202ENST00000416438 C1orf140Q5VVS0 124 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 GSG1LQ6UXU4 331 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 MESP1Q9BRJ9 268 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 TXNIPQ9H3M7 391 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 FREM3P0C091 2139 aa13.22□□□□□ -0.29
LINC00475-202ENST00000416438 IGHV3-20A0A0C4DH32 117 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 OR4E1P0C645 316 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 PPP3CBP16298 524 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 ZNF28P17035 718 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 NR0B2Q15466 257 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 GLT8D1Q68CQ7 371 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 CATSPERDQ86XM0 798 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 OR4S1Q8NGB4 309 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 ASB17Q8WXJ9 295 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 TTYH1Q9H313 450 aaPredicted RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 PLPP3O14495 311 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 TSPAN4O14817 238 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 NPIPB7O75200 414 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 TPPPO94811 219 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 AMY2AP04746 511 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 HOXD4P09016 255 aaPredicted RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 MYF5P13349 255 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 BTN1A1Q13410 526 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 SCGB2B2Q4G0G5 96 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 KCTD18Q6PI47 426 aaPredicted RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 LANCL3Q6ZV70 420 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 RELL2Q8NC24 303 aaPredicted RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 SCARB1Q8WTV0 552 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 SLC41A2Q96JW4 573 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 WWTR1Q9GZV5 400 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
LINC00475-202ENST00000416438 PRMT8Q9NR22 394 aaPredicted RBP13.21□□□□□ -0.29
LINC00475-202ENST00000416438 IGKV1D-43A0A0B4J1Z2 117 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 TUBAL3A6NHL2 446 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 EIF1AYO14602 144 aaKnown RBP13.2□□□□□ -0.3
LINC00475-202ENST00000416438 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 ITGB2P05107 769 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 OR1D5P58170 312 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 ROM1Q03395 351 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 ELAVL1Q15717 326 aaKnown RBP13.2□□□□□ -0.3
LINC00475-202ENST00000416438 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
LINC00475-202ENST00000416438 STPG2Q8N412 459 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 OR1L3Q8NH93 324 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 VSX1Q9NZR4 365 aaPredicted RBP13.2□□□□□ -0.3
LINC00475-202ENST00000416438 MED11Q9P086 117 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 CKLFQ9UBR5 152 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 ASXL3Q9C0F0 2248 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 TMEM235A6NFC5 223 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 LILRA5A6NI73 299 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 HSPB2A8KAH6 182 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 H3BMH7 237 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 IGLV3-19P01714 112 aa13.2□□□□□ -0.3
LINC00475-202ENST00000416438 CD2P06729 351 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms