RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 MRPL15Q9P015 296 aaKnown RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 M0R135 149 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 FOXF1Q12946 379 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 SLC17A1Q14916 467 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 MSRB3Q8IXL7 192 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 OR4N2Q8NGD1 307 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 MMP25Q9NPA2 562 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 RBMX2Q9Y388 322 aaKnown RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 FBXO7Q9Y3I1 522 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 SULT1C2O00338 296 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CRYAAP02489 173 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 LIPAP38571 399 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 FXYD4P59646 89 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 IKZF1Q13422 519 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CTU2Q2VPK5 515 aaKnown RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 NOXO1Q8NFA2 376 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 OR1M1Q8NGA1 313 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ABHD5Q8WTS1 349 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 MSI2Q96DH6 328 aaKnown RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF845Q96IR2 970 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 B3GNT2Q9NY97 397 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CACFD1Q9UGQ2 172 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 B9D1Q9UPM9 204 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 PIGLQ9Y2B2 252 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
PTPRF-205ENST00000414879 GOSR2O14653 212 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 IGHV4-34P06331 123 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 FCARP24071 287 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 CEBPGP53567 150 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 CDK5R1Q15078 307 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 OR1C1Q15619 314 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 DEFB109BQ30KR1 87 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 ACER2Q5QJU3 275 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF573Q86YE8 665 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 LRRC3BQ96PB8 259 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 C1orf123Q9NWV4 160 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 NDRG3Q9UGV2 375 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TRAPPC2LQ9UL33 140 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 HRH3Q9Y5N1 445 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 LOC107986453A0A1B0GWG9 222 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 DNPH1O43598 174 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 NXPH2O95156 264 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 GDNFP39905 211 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 VEGFCP49767 419 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
PTPRF-205ENST00000414879 FOXN4Q96NZ1 517 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 SELENOIQ9C0D9 397 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 LHX9Q9NQ69 397 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 DECR2Q9NUI1 292 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 ANKRD10Q9NXR5 420 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 DNAJB12Q9NXW2 375 aaKnown RBP10.85□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF226Q9NYT6 803 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TMEM82A0PJX8 343 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 GABARAPH6UMI1 98 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
PTPRF-205ENST00000414879 CCR9P51686 369 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 RAC1P63000 192 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 PAQR6Q6TCH4 344 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 GPR155Q7Z3F1 870 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 NOXA1Q86UR1 476 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 C1orf87Q8N0U7 546 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 C3orf49Q96BT1 292 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 RCE1Q9Y256 329 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TP53TG5Q9Y2B4 290 aa10.85□□□□□ -0.67
PTPRF-205ENST00000414879 TRGV5A0A0B4J1U4 118 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 TRAV1-2A0A0B4J238 106 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 MEIOCA2RUB1 952 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 SPINT2O43291 252 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 MED6O75586 246 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 CNOT4O95628 575 aaKnown RBP10.84□□□□□ -0.67
PTPRF-205ENST00000414879 PTPN6P29350 595 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 ETV5P41161 510 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 TGM4P49221 684 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 ETV1P50549 477 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 BTG1P62324 171 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 BLOC1S1P78537 153 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 SQSTM1Q13501 440 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 GLYATL3Q5SZD4 288 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 C9orf135Q5VTT2 229 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 PRAMEF9Q5VWM5 478 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 LILRB2Q8N423 598 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 PP6455Q8WZ26 134 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
PTPRF-205ENST00000414879 SLAMF9Q96A28 289 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 FBXL4Q9UKA2 621 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-205ENST00000414879 CCL27Q9Y4X3 112 aa10.84□□□□□ -0.67
PTPRF-205ENST00000414879 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms