RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 MPV17P39210 176 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 OPRD1P41143 372 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 ATP1B3P54709 279 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 CDKN2DP55273 166 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 YBEYP58557 167 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 CDK16Q00536 496 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 KLRC3Q07444 240 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 C2orf54Q08AI8 447 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 DEGS2Q6QHC5 323 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 ENPP6Q6UWR7 440 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 Q6ZRN7 208 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 TMPPEQ6ZT21 453 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 CATSPER4Q7RTX7 472 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 ZFP41Q8N8Y5 198 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 FAM133AQ8N9E0 248 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 TMEM186Q96B77 213 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 OTUB2Q96DC9 234 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 TRIM44Q96DX7 344 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 HSD17B10Q99714 261 aaKnown RBP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 RSG1Q9BU20 258 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 C1orf50Q9BV19 199 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 FAM49BQ9NUQ9 324 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 MGAT4BQ9UQ53 548 aa-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-43P-201ENST00000410628 CR1P17927 2039 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 BRD4O60885 1362 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 TRAV6A0A075B6T7 132 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 TRAV19A0A0A6YYK7 116 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 IGHV3-72A0A0B4J1Y9 119 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 TRAV39A0A0B4J263 110 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 A0A0B4J2A0 478 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 A0A1W2PNV4 684 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SLC9B1P1A6NJY1 282 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 BCAS2O75934 225 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SCELO95171 688 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 FSTL3O95633 263 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 PTBP3O95758 552 aaKnown RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 CD37P11049 281 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 CEACAM3P40198 252 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 HCAR3P49019 387 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 KLF3P57682 345 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 UBE2NP61088 152 aaKnown RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 ELF3P78545 371 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 BIKQ13323 160 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 C1orf220Q5T0J3 134 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 RAET1GQ6H3X3 334 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 CCDC91Q7Z6B0 441 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 ANKRD23Q86SG2 305 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 DEFB119Q8N690 84 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 OR10J6PQ8NGY7 276 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 OR2G2Q8NGZ5 317 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 EMG1Q92979 244 aaKnown RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 MRGPRFQ96AM1 343 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 OR8B4Q96RC9 309 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SORT1Q99523 831 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SH3GL3Q99963 347 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 NHEJ1Q9H9Q4 299 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 CSNK1G1Q9HCP0 422 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 RAB18Q9NP72 206 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 KCNJ16Q9NPI9 418 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 SHPKQ9UHJ6 478 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 BAZ2AQ9UIF9 1905 aaKnown RBP-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 FAT4Q6V0I7 4981 aa-0.13□□□□□ -2.43
RNU4-43P-201ENST00000410628 USP24Q9UPU5 2620 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 A0A1W2PNM2 257 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 GABRR3A8MPY1 467 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 CD3GP09693 182 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 CCDC192P0DO97 292 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 THRAP10827 490 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 ETS1P14921 441 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 GNA11P29992 359 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 ATP5C1P36542 298 aaKnown RBP-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 CCNA1P78396 465 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 PRDX4Q13162 271 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 GANABQ14697 944 aaKnown RBP-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 PDK1Q15118 436 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 YIF1BQ5BJH7 314 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 PDZD11Q5EBL8 140 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 LIN9Q5TKA1 542 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 ELMOD2Q8IZ81 293 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 MAIP1Q8WWC4 291 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 SLC13A3Q8WWT9 602 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 UBE2E3Q969T4 207 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 NTAN1Q96AB6 310 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 EFHD2Q96C19 240 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 C4orf36Q96KX1 117 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 SAMD8Q96LT4 415 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 OR2V2Q96R30 315 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 CLCC1Q96S66 551 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 FAIM2Q9BWQ8 316 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 MRPL13Q9BYD1 178 aaKnown RBP-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 ELOVL3Q9HB03 270 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 SUN2Q9UH99 717 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 ST3GAL6Q9Y274 331 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 TMED5Q9Y3A6 229 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 TIMM10BQ9Y5J6 103 aa-0.14□□□□□ -2.43
RNU4-43P-201ENST00000410628 MYO9BQ13459 2157 aa-0.15□□□□□ -2.43
RNU4-43P-201ENST00000410628 A0A0J9YXV3 536 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms