RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 DNPH1O43598 174 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 CD37P11049 281 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 CHAF1BQ13112 559 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 MELKQ14680 651 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 ZFP69Q49AA0 526 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 NHLRC1Q6VVB1 395 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 CMTM4Q8IZR5 234 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 WDSUB1Q8N9V3 476 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 TSEN15Q8WW01 171 aaKnown RBP12.14□□□□□ -0.47
LIMS1-205ENST00000410093 HSD17B8Q92506 261 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 PMEPA1Q969W9 287 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
LIMS1-205ENST00000410093 SLC25A44Q96H78 314 aaPredicted RBP12.14□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 NLKQ9UBE8 527 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 PADI1Q9ULC6 663 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 HHLA2Q9UM44 414 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 LRP12Q9Y561 859 aa12.14□□□□□ -0.47
LIMS1-205ENST00000410093 TPRP12270 2363 aaKnown RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 C2orf72A6NCS6 295 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 ACOT7O00154 380 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 LAP3P28838 519 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 MMP16P51512 607 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 FOXL2P58012 376 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 MLF1P58340 268 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 SSBP1Q04837 148 aaKnown RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 CD300CQ08708 224 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 TBRG1Q3YBR2 411 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 SLC36A2Q495M3 483 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 ATAD3CQ5T2N8 411 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 RPS19BP1Q86WX3 136 aaKnown RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 OR11G2Q8NGC1 345 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 RNF133Q8WVZ7 376 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 FCAMRQ8WWV6 532 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 ST6GAL2Q96JF0 529 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 GFI1Q99684 422 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 C1orf198Q9H425 327 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 CCDC86Q9H6F5 360 aaKnown RBP12.13□□□□□ -0.47
LIMS1-205ENST00000410093 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 KLK13Q9UKR3 277 aa12.13□□□□□ -0.47
LIMS1-205ENST00000410093 A0A0A6YYH2 397 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM8BA6NDV4 472 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 A6NJ64 397 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 AQP7P3A6NL99 342 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 H3BML4 177 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
LIMS1-205ENST00000410093 CBR3O75828 277 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 KRT33AO76009 404 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 WISP1O95388 367 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 CCL4P13236 92 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 HLA-DOBP13765 273 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 BIDP55957 195 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 CLRN1P58418 232 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 CSNK2A1P68400 391 aaPredicted RBP12.12□□□□□ -0.47
LIMS1-205ENST00000410093 SSPNQ14714 243 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 POU4F3Q15319 338 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 KCNJ8Q15842 424 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 HES5Q5TA89 166 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM225Q6GV28 225 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 TMPPEQ6ZT21 453 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 FCRLAQ7L513 359 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 KRT74Q7RTS7 529 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 LIX1LQ8IVB5 337 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 NKAIN3Q8N8D7 197 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 NOXO1Q8NFA2 376 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
LIMS1-205ENST00000410093 ZFP3Q96NJ6 502 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 TAAR9Q96RI9 348 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 SLC25A18Q9H1K4 315 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 ANKRD10Q9NXR5 420 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 OR5V1Q9UGF6 321 aa12.12□□□□□ -0.47
LIMS1-205ENST00000410093 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
LIMS1-205ENST00000410093 COL27A1Q8IZC6 1860 aaPredicted RBP12.12□□□□□ -0.47
LIMS1-205ENST00000410093 ZNF726A6NNF4 738 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 C1QTNF9BB2RNN3 333 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SLC17A2O00624 439 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 CDK2AP1O14519 115 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 EFNA2O43921 213 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 HPP00738 406 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 YES1P07947 543 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms