RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 XKRYO14609 159 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 WNT9BO14905 357 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 AHCYL1O43865 530 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 RPL4P36578 427 aaKnown RBP12.56□□□□□ -0.4
CBX3-203ENST00000409747 WNT5AP41221 380 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 SRSF2Q01130 221 aaKnown RBP12.56□□□□□ -0.4
CBX3-203ENST00000409747 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 TSTQ16762 297 aaKnown RBP12.56□□□□□ -0.4
CBX3-203ENST00000409747 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 ACSM5Q6NUN0 579 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 MBOAT2Q6ZWT7 520 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 RRM2BQ7LG56 351 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 ZER1Q7Z7L7 766 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 SLC15A3Q8IY34 581 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 ABHD4Q8TB40 342 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 SLC25A40Q8TBP6 338 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 KLF14Q8TD94 323 aaPredicted RBP12.56□□□□□ -0.4
CBX3-203ENST00000409747 RAB1CQ92928 201 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 DIRC2Q96SL1 478 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 METTL17Q9H7H0 456 aaPredicted RBP12.56□□□□□ -0.4
CBX3-203ENST00000409747 GRHPRQ9UBQ7 328 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 TMEM5Q9Y2B1 443 aa12.56□□□□□ -0.4
CBX3-203ENST00000409747 J3KTA2 159 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 HAX1O00165 279 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 PNPP00491 289 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 COX4I1P13073 169 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 MMP15P51511 669 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 SLC7A2P52569 658 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 PPP1CBP62140 327 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 MVKQ03426 396 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 AVPI1Q5T686 147 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 CLDN22Q8N7P3 220 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 OR13C2Q8NGS9 318 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 HSH2DQ96JZ2 352 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 OR2J1Q9GZK6 312 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 EFCAB1Q9HAE3 211 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 SNX13Q9Y5W8 968 aa12.55□□□□□ -0.4
CBX3-203ENST00000409747 A0A087WUU8 490 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 FFAR1O14842 300 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 SPRY3O43610 288 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 SERPINA1P01009 418 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ADH4P08319 380 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 CD14P08571 375 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 COX5BP10606 129 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ITGA2P17301 1181 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 TUBG1P23258 451 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 MPV17P39210 176 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 SCRN3Q0VDG4 424 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 HACD2Q6Y1H2 254 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 RFPL4BQ6ZWI9 263 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 TMPRSS11FQ6ZWK6 438 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 NPEPL1Q8NDH3 523 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 FAM162AQ96A26 154 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 C4orf45Q96LM5 186 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 RPS6KA6Q9UK32 745 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 WIPI2Q9Y4P8 454 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 A0A0G2JMP0 313 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 A0A0X1KG70 313 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 NME4O00746 187 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 PRSS23O95084 383 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 MPZL1O95297 269 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 GSTM3P21266 225 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 GPR4P46093 362 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 FHL1Q13642 323 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ENDOGQ14249 297 aaKnown RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 ZBED5Q49AG3 693 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 PEG10Q86TG7 708 aaKnown RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ZFAND2BQ8WV99 257 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 GTF3AQ92664 365 aaKnown RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 ZNF570Q96NI8 536 aa12.54□□□□□ -0.4
CBX3-203ENST00000409747 KCTD14Q9BQ13 255 aaPredicted RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
CBX3-203ENST00000409747 ABHD16AO95870 558 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 IGHV2-5P01817 119 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 GSK3BP49841 420 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 NUDT2P50583 147 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
CBX3-203ENST00000409747 ZNF418Q8TF45 676 aaPredicted RBP12.53□□□□□ -0.4
CBX3-203ENST00000409747 CCL17Q92583 94 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 COG8Q96MW5 612 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 GAL3ST1Q99999 423 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 NMNAT1Q9HAN9 279 aaPredicted RBP12.53□□□□□ -0.4
CBX3-203ENST00000409747 MED4Q9NPJ6 270 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 ADAM18Q9Y3Q7 739 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
CBX3-203ENST00000409747 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
CBX3-203ENST00000409747 PRSS37A4D1T9 235 aa12.52□□□□□ -0.41
CBX3-203ENST00000409747 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms