RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 NANOS1Q8WY41 292 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 BCL2L2Q92843 193 aaPredicted RBP14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 NABP1Q96AH0 204 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 FOXN4Q96NZ1 517 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 INTS14Q96SY0 518 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 CDADC1Q9BWV3 514 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 MARCH7Q9H992 704 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 POLR1DQ9Y2S0 133 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 COMMD3-BMI1R4GMX3 469 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 IRGMA1A4Y4 181 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 C12orf71A8MTZ7 269 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 SEC14L2O76054 403 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 TFP02787 698 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 CST2P09228 141 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 DBTP11182 482 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 PAX7P23759 505 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ENTPD1P49961 510 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 UBE2NP61088 152 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 PCBD1P61457 104 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ADAM8P78325 824 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF91Q05481 1191 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 FAM27E3Q08E93 113 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 TBRG1Q3YBR2 411 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 KLHL22Q53GT1 634 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 C6orf141Q5SZD1 244 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 SHFQ7M4L6 423 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 SSX8Q7RTT4 187 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC16A14Q7RTX9 510 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ERI1Q8IV48 349 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF511Q8NB15 262 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 FAM222BQ8WU58 562 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 C11orf40Q8WZ69 217 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 CNN2Q99439 309 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 OBP2BQ9NPH6 170 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 MRPL22Q9NWU5 206 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 SCN3BQ9NY72 215 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 CRIM1Q9NZV1 1036 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 PCDHGB1Q9Y5G3 927 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 DCHS2Q6V1P9 2916 aa14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 ANKHD1Q8IWZ3 2542 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-208ENST00000409531 APCP25054 2843 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 A0A096LPE4 126 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 A0A1W2PPZ6 126 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 TVP23AA6NH52 213 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 MPZL1O95297 269 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 GPANK1O95872 356 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 PPP3CBP16298 524 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 UGT2B10P36537 528 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 NUDT6P53370 316 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 DBPQ10586 325 aaPredicted RBP14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 AQP6Q13520 282 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 SMN1Q16637 294 aaKnown RBP14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC36A2Q495M3 483 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 TEX30Q5JUR7 227 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 TIMM23BQ5SRD1 257 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC16A9Q7RTY1 509 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 SYT9Q86SS6 491 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 TIGD4Q8IY51 512 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 LRRC18Q8N456 261 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 OR6N2Q8NGY6 317 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 MNTQ99583 582 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 YIPF3Q9GZM5 350 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 MOV10Q9HCE1 1003 aaKnown RBP14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 EMC7Q9NPA0 242 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 PLCXD1Q9NUJ7 323 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 BLOC1S6Q9UL45 172 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 LRCH1Q9Y2L9 728 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 AMDHD2Q9Y303 409 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 TMEM14AQ9Y6G1 99 aa14.44□□□□□ -0.1
TSPAN4-208ENST00000409531 ARPC4-TTLL3A0A0A6YYG9 625 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 OR5H1A6NKK0 313 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF593O00488 134 aaPredicted RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 UBL3O95164 117 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 FADS2O95864 444 aaKnown RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 WNT11O96014 354 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 SBK2P0C263 348 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 CCDC159P0C7I6 412 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 EPXP11678 715 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 CAPZA2P47755 286 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 RAB40BQ12829 278 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 MEP1BQ16820 701 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 RBM48Q5RL73 367 aaKnown RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 LYPD4Q6UWN0 246 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 B3GLCTQ6Y288 498 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 SKA3Q8IX90 412 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 BPIFB6Q8NFQ5 453 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 OR51G2Q8NGK0 314 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 OR2AJ1Q8NGZ0 328 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 LINC01560Q8TB33 94 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 MUCL1Q96DR8 90 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 RNFT2Q96EX2 444 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 SH3GL3Q99963 347 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF416Q9BWM5 594 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 ACTR6Q9GZN1 396 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 WDR76Q9H967 626 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 AMBNQ9NP70 447 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 CCNB1IP1Q9NPC3 277 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC17A5Q9NRA2 495 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 MRPS18AQ9NVS2 196 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms