RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FBXL14Q8N1E6 418 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 MUC15Q8N387 334 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 PARP8Q8N3A8 854 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 IQCF1Q8N6M8 205 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CYB561A3Q8NBI2 242 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CPEB3Q8NE35 698 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 TRAF4Q9BUZ4 470 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 RBM4Q9BWF3 364 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CXXC4Q9H2H0 198 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 PRRC2AP48634 2157 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 RIIAD1A6NNX1 92 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 OVOL3O00110 214 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 SMPD2O60906 423 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 MPZL1O95297 269 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 GAAP10253 952 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 NR4A1P22736 598 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 GRK5P34947 590 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 CENPAP49450 140 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 NKX6-1P78426 367 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 DAG1Q14118 895 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 TESK1Q15569 626 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 ALDH16A1Q8IZ83 802 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 SLC37A3Q8NCC5 494 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 OR1J2Q8NGS2 313 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 OR2T4Q8NH00 348 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 C11orf40Q8WZ69 217 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 GABARAPL1Q9H0R8 117 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 SEMA6AQ9H2E6 1030 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 FN3KQ9H479 309 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 CMC2Q9NRP2 79 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 SPEF1Q9Y4P9 236 aa17.17■□□□□ 0.34
PDLIM2-207ENST00000409417 ITPR3Q14573 2671 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 SNAP29O95721 258 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 PAX1P15863 534 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 STOMP27105 288 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 APEX1P27695 318 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 GALK2Q01415 458 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 DBPQ10586 325 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 CRMP1Q14194 572 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 GINS1Q14691 196 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 TBC1D28Q2M2D7 210 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 SLC26A10Q8NG04 563 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 AKR7LQ8NHP1 331 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 WNT5BQ9H1J7 359 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF442Q9H7R0 627 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 CBLN4Q9NTU7 201 aa17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF701Q9NV72 531 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-207ENST00000409417 AKAP9Q99996 3911 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 GPANK1O95872 356 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 TFP02787 698 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 HMGN1P05114 100 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF3P17036 446 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 APLNRP35414 380 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 SERPINF1P36955 418 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 SLC25A1P53007 311 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 CDK5Q00535 292 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 SCRN3Q0VDG4 424 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 AQP6Q13520 282 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 KDM4DQ6B0I6 523 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 KRT80Q6KB66 452 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 ACSM5Q6NUN0 579 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 VHLLQ6RSH7 139 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 LRRC75A-AS1Q8N1F1 130 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 PROKR2Q8NFJ6 384 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 PKP2Q99959 881 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 GSX2Q9BZM3 304 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 NMNAT2Q9BZQ4 307 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 CDH20Q9HBT6 801 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 ASH2LQ9UBL3 628 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 OAZ3Q9UMX2 235 aa17.15■□□□□ 0.34
PDLIM2-207ENST00000409417 FAM171A2A8MVW0 826 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 VSTM5A8MXK1 200 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 OR4A8P0C604 315 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 CCL2P13500 99 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 SNTB2Q13425 540 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 ADIPOQQ15848 244 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 ZSCAN26Q16670 478 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 MEP1BQ16820 701 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 OTPQ5XKR4 325 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 ZNF774Q6NX45 483 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 PAQR4Q8N4S7 273 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 POM121L2Q96KW2 1035 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 OSBPL10Q9BXB5 764 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 TEX12Q9BXU0 123 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 KRT84Q9NSB2 600 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 POLR1DQ9Y2S0 133 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 CELSR1Q9NYQ6 3014 aa17.14■□□□□ 0.33
PDLIM2-207ENST00000409417 PYCR1P32322 319 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 THBS4P35443 961 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 CRISP1P54107 249 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 ESRRGP62508 458 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 TEKQ02763 1124 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 C11orf71Q6IPW1 123 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 SPNS3Q6ZMD2 512 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 OR9Q1Q8NGQ5 310 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 SLC25A19Q9HC21 320 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 S100A14Q9HCY8 104 aa17.13■□□□□ 0.33
PDLIM2-207ENST00000409417 LOC100509620A0A075B734 347 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 C5orf49A4QMS7 147 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 SAC3D1A6NKF1 404 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms