RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NOX3Q9HBY0 568 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 EMC7Q9NPA0 242 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 POLE4Q9NR33 117 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 SMPD2O60906 423 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 SNAP29O95721 258 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 SCG5P05408 212 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 GYPBP06028 91 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 PATE4P0C8F1 98 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 CLUP10909 449 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 MSR1P21757 451 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 PAICSP22234 425 aaKnown RBP22.12■■□□□ 1.13
U2AF1-203ENST00000398137 LAP3P28838 519 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 SLC25A1P53007 311 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 OGFRL1Q5TC84 451 aaPredicted RBP22.12■■□□□ 1.13
U2AF1-203ENST00000398137 SSX8Q7RTT4 187 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 SLC16A14Q7RTX9 510 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.12■■□□□ 1.13
U2AF1-203ENST00000398137 MDP1Q86V88 176 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 CCDC36Q8IYA8 594 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 OR2T4Q8NH00 348 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 NMNAT2Q9BZQ4 307 aa22.12■■□□□ 1.13
U2AF1-203ENST00000398137 M0R1B8 84 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 MGRN1O60291 552 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 MPZL1O95297 269 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 GAAP10253 952 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 SPI1P17947 270 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 NR1H2P55055 460 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 PIGFQ07326 219 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 PLBD1Q6P4A8 553 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 UGT2A3Q6UWM9 527 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 CIARTQ8N365 385 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-203ENST00000398137 OR51L1Q8NGJ5 315 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 C18orf12Q96KH6 178 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 NGBQ9NPG2 151 aa22.11■■□□□ 1.13
U2AF1-203ENST00000398137 HINT3Q9NQE9 182 aaKnown RBP22.11■■□□□ 1.13
U2AF1-203ENST00000398137 PRR23D1E9PI22 279 aaPredicted RBP22.1■■□□□ 1.13
U2AF1-203ENST00000398137 PRKYO43930 277 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 UBL3O95164 117 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 PRR23D2P0DMB1 279 aaPredicted RBP22.1■■□□□ 1.13
U2AF1-203ENST00000398137 GLO1Q04760 184 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 GSG1Q2KHT4 349 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 C1QTNF12Q5T7M4 302 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 CPOQ8IVL8 374 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 PACRGLQ8N7B6 248 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 ZNRF4Q8WWF5 429 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 PERPQ96FX8 193 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 GRIP2Q9C0E4 1043 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 SMPD3Q9NY59 655 aaPredicted RBP22.1■■□□□ 1.13
U2AF1-203ENST00000398137 B3GNT2Q9NY97 397 aa22.1■■□□□ 1.13
U2AF1-203ENST00000398137 NIPBLQ6KC79 2804 aaeCLIP22.09■■□□□ 1.13
U2AF1-203ENST00000398137 CADP27708 2225 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 USF3Q68DE3 2245 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 ENDOGQ14249 297 aaKnown RBP22.09■■□□□ 1.13
U2AF1-203ENST00000398137 MEP1BQ16820 701 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 SLC36A2Q495M3 483 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 NCMAPQ5T1S8 102 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 FAM27BQ5VT28 67 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 CXXC5Q7LFL8 322 aaKnown RBP22.09■■□□□ 1.13
U2AF1-203ENST00000398137 SLC26A10Q8NG04 563 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 C11orf40Q8WZ69 217 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 ZNF416Q9BWM5 594 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 RNF121Q9H920 327 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 C8orf4Q9NR00 106 aa22.09■■□□□ 1.13
U2AF1-203ENST00000398137 HS3ST1O14792 307 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 ATP6V1G2O95670 118 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 RAB36O95755 333 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 HLA-DQA2P01906 255 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 CELA3BP08861 270 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 CST2P09228 141 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 PTDSS1P48651 473 aaKnown RBP22.08■■□□□ 1.13
U2AF1-203ENST00000398137 IDH3GP51553 393 aaPredicted RBP22.08■■□□□ 1.13
U2AF1-203ENST00000398137 LYPD4Q6UWN0 246 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 PRSS57Q6UWY2 283 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 ZNF611Q8N823 705 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 TCEANCQ8N8B7 351 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 BBS1Q8NFJ9 593 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 OR6K6Q8NGW6 343 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 FAM81AQ8TBF8 368 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 NRG4Q8WWG1 115 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 PTP4A1Q93096 173 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 FBXO17Q96EF6 278 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 GSX2Q9BZM3 304 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 OR51V1Q9H2C8 321 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 KCNN2Q9H2S1 579 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 CCNB1IP1Q9NPC3 277 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 POLR1DQ9Y2S0 133 aa22.08■■□□□ 1.13
U2AF1-203ENST00000398137 DLGAP1O14490 977 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 TFP02787 698 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 INHBBP09529 407 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 PAX1P15863 534 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 CBR1P16152 277 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 PTH2RP49190 550 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 RAB1AP62820 205 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 HSF2Q03933 536 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 BSPH1Q075Z2 132 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 RIPK1Q13546 671 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 TMEM53Q6P2H8 277 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 DPPA2Q7Z7J5 298 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 BIVMQ86UB2 503 aa22.07■■□□□ 1.12
U2AF1-203ENST00000398137 MYPOPQ86VE0 399 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms