RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ISYNA1Q9NPH2 558 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 IFT46Q9NQC8 304 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 NLE1Q9NVX2 485 aaPredicted RBP1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 SLC25A37Q9NYZ2 338 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 TREM2Q9NZC2 230 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 MAT2BQ9NZL9 334 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 VAPAQ9P0L0 249 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 MUTYHQ9UIF7 546 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 C3orf18Q9UK00 162 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 POLR3HQ9Y535 204 aaPredicted RBP1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 V9GY05 133 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 FHOD3Q2V2M9 1422 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 KIAA1210Q9ULL0 1709 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 MSH6P52701 1360 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 ANKRD30BQ9BXX2 1392 aa1.71□□□□□ -2.14
HMGN2P39-201ENST00000398005 ABCB11O95342 1321 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 MAP3K15Q6ZN16 1313 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RAD50Q92878 1312 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 USP42Q9H9J4 1324 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 FANCIQ9NVI1 1328 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 IGKV1D-8A0A087WSZ0 117 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 A0A0A6YYD5 115 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 A0A1B0GU03 582 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ANKRD20A5PA0PJZ0 165 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ISPDA4D126 451 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 A6NIZ1 184 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 DHRS7CA6NNS2 312 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PMS2P5A8MQ11 134 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 FOXI3A8MTJ6 420 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ZNF487B1APH4 448 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ANKRD63C9JTQ0 380 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 GABRPO00591 440 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 NTN3O00634 580 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 NME4O00746 187 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 NUPL2O15504 423 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RBBP9O75884 186 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RPP14O95059 124 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 UTS2O95399 124 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ATP6V1G2O95670 118 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PPP1R3DO95685 299 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RAB3DO95716 219 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 SNAP29O95721 258 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 TIMP1P01033 207 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 SERPINA6P08185 405 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CT45A6P0DMU7 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CT45A5P0DMU8 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CT45A10P0DMU9 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CT45A7P0DMV0 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 LIPCP11150 499 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PSKH1P11801 424 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 GFAPP14136 432 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RAB5AP20339 215 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PVALBP20472 110 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CXCR2P25025 360 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PRKAR2BP31323 418 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ACTR1BP42025 376 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CDKN2AP42771 156 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 GLP1RP43220 463 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 GPR6P46095 362 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RGS6P49758 472 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PRELPP51888 382 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 HCCSP53701 268 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 HILS1P60008 231 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RAP1BP61224 184 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 MAGOHP61326 146 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 MRPS25P82663 173 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 REEP5Q00765 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 TGFBR3Q03167 851 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 COL10A1Q03692 680 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ACVR1Q04771 509 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 PRKCDQ05655 676 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 DPTQ07507 201 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ST3GAL4Q11206 333 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 BNIP2Q12982 314 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 DYNC1I2Q13409 638 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 MED21Q13503 144 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 RAB31Q13636 194 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CKAP5Q14008 2032 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CLINT1Q14677 625 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 SIX1Q15475 284 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 OR7A5Q15622 319 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 LTB4RQ15722 352 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 ZBTB6Q15916 424 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 POU2AF1Q16633 256 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 NRF1Q16656 503 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 BSXQ3C1V8 233 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CT45A1Q5HYN5 189 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 VAX1Q5SQQ9 334 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CLVS2Q5SYC1 327 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CEP85LQ5SZL2 805 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 CCNJQ5T5M9 372 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 SDHAF4Q5VUM1 108 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 UBE2UQ5VVX9 321 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 THOC7Q6I9Y2 204 aaKnown RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 OR5M10Q6IEU7 315 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 FAM53AQ6NSI3 398 aaPredicted RBP1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 UFSP1Q6NVU6 142 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 SPSB3Q6PJ21 355 aa1.7□□□□□ -2.14
HMGN2P39-201ENST00000398005 REG3GQ6UW15 175 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms