RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 OR52J3Q8NH60 311 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 HPS1Q92902 700 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 Q96M85 177 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 COG8Q96MW5 612 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 SNX18Q96RF0 628 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 TRIM15Q9C019 465 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 POLE4Q9NR33 117 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 NKIRAS2Q9NYR9 191 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 ADAM18Q9Y3Q7 739 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 V9GYQ6 96 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 IGKV1D-43A0A0B4J1Z2 117 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 C5orf49A4QMS7 147 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 ARPC3O15145 178 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 DIRAS1O95057 198 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 IGHV3-13P01766 116 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 GCH1P30793 250 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 RRM2P31350 389 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 TEKQ02763 1124 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 TSPAN31Q12999 210 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 AQP6Q13520 282 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 SEC23BQ15437 767 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 CARTPTQ16568 116 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 RFX4Q33E94 735 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 ZNF718Q3SXZ3 478 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 ZMAT1Q5H9K5 638 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 C1orf94Q6P1W5 598 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 TMEM154Q6P9G4 183 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 ZER1Q7Z7L7 766 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 DHFR2Q86XF0 187 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 MEX3DQ86XN8 651 aaKnown RBP11.97□□□□□ -0.49
SEC13-204ENST00000397099 CPEB3Q8NE35 698 aaKnown RBP11.97□□□□□ -0.49
SEC13-204ENST00000397099 FANK1Q8TC84 345 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 GNPDA2Q8TDQ7 276 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 FOXN4Q96NZ1 517 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 MDFIQ99750 246 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 SYT3Q9BQG1 590 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 CHODLQ9H9P2 273 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 CYSLTR2Q9NS75 346 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 CDC42EP3Q9UKI2 254 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 MXRA5Q9NR99 2828 aa11.97□□□□□ -0.49
SEC13-204ENST00000397099 RTTNQ86VV8 2226 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.96□□□□□ -0.492e-7■□□□□ 11.3
SEC13-204ENST00000397099 J3QW42 95 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 LY6HO94772 140 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 RENP00797 406 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 FAM157BP0CG42 384 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 ZNF23P17027 643 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 ZNF26P17031 533 aaPredicted RBP11.96□□□□□ -0.49
SEC13-204ENST00000397099 ACHEP22303 614 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 CCNOP22674 350 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 MSX2P35548 267 aaPredicted RBP11.96□□□□□ -0.49
SEC13-204ENST00000397099 MAGEA2P43356 314 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 GSSP48637 474 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 CHN2P52757 468 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 TMEM33P57088 247 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 GGTLC2Q14390 218 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 FAM98BQ52LJ0 330 aaKnown RBP11.96□□□□□ -0.49
SEC13-204ENST00000397099 C6orf52Q5T4I8 152 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 LCN8Q6JVE9 175 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 HIPK1Q86Z02 1210 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 NPEPL1Q8NDH3 523 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 OR52L1Q8NGH7 329 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 OR1J1Q8NGS3 322 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 RDH5Q92781 318 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 ASB9Q96DX5 294 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 WNT5BQ9H1J7 359 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 SYT4Q9H2B2 425 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 OR52D1Q9H346 318 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
SEC13-204ENST00000397099 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
SEC13-204ENST00000397099 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 PLSCR5A0PG75 271 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 SGCEO43556 437 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 SLC16A7O60669 478 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 TACSTD2P09758 323 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 CCL2P13500 99 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 NOS3P29474 1203 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 GLO1Q04760 184 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 RIN1Q13671 783 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 KCNMB1Q16558 191 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 JAZF1Q86VZ6 243 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 CLDN22Q8N7P3 220 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 AKR7LQ8NHP1 331 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 LRGUKQ96M69 825 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 ERMAPQ96PL5 475 aaPredicted RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 DCLRE1CQ96SD1 692 aaKnown RBP11.95□□□□□ -0.5
SEC13-204ENST00000397099 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 BPESC1Q9GZL8 116 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms