RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 BARHL1Q9BZE3 327 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ACSS1Q9NUB1 689 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PTRH2Q9Y3E5 179 aaKnown RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 HEMK1Q9Y5R4 338 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF354AO60765 605 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SFTA3P0C7M3 94 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 TBC1D28Q2M2D7 210 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 RELL2Q8NC24 303 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ABHD4Q8TB40 342 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 GASTP01350 101 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 CST2P09228 141 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 OR1D4P47884 311 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PPOXP50336 477 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PMS2P11Q13670 270 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ACOT7LQ6ZUV0 252 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 TMEM135Q86UB9 458 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SIRT3Q9NTG7 399 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SNX11Q9Y5W9 270 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ALX3O95076 343 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SEMA4FO95754 770 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 CD46P15529 392 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 FGF7P21781 194 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SOX18P35713 384 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 UBE3DQ7Z6J8 389 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ISCA2Q86U28 154 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF485Q8NCK3 441 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 TIMM9Q9Y5J7 89 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 CCSO14618 274 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PTGER1P34995 402 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 TMEM184AQ6ZMB5 413 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 RABEPKQ7Z6M1 372 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 GATA6Q92908 595 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ULBP3Q9BZM4 244 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 GPR55Q9Y2T6 319 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PIK3C2AO00443 1686 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SOWAHBA6NEL2 793 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 OXA1LQ15070 435 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 ETFDHQ16134 617 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 LEXMQ3ZCV2 418 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 FFAR4Q5NUL3 377 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.88
COL4A4-201ENST00000396625 CYHR1Q6ZMK1 362 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 CTU1Q7Z7A3 348 aaKnown RBP9.52□□□□□ -0.88
COL4A4-201ENST00000396625 EXTL1Q92935 676 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 NCOR1O75376 2440 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 COX7A2P2O60397 106 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 ABHD16AO95870 558 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 TMED6Q8WW62 240 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 SORT1Q99523 831 aa9.52□□□□□ -0.88
COL4A4-201ENST00000396625 TINAGL1Q9GZM7 467 aaPredicted RBP9.52□□□□□ -0.88
COL4A4-201ENST00000396625 UBE2L5PA0A1B0GUS4 154 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 HMGN2P05204 90 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 BCL6P41182 706 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 ARSDP51689 593 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 WNT7BP56706 349 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 TSEN54Q7Z6J9 526 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 ZNF264O43296 627 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 C1QBP02746 253 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 GPM6AP51674 278 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 HIST1H3AP68431 136 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 OR14A16Q8NHC5 309 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 GSX1Q9H4S2 264 aaPredicted RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 CLMPQ9H6B4 373 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 ZNF629Q9UEG4 869 aaPredicted RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 ZCWPW2A0A1B0GU75 182 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 TRABD2BA6NFA1 517 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 SDC1P18827 310 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 SLC5A2P31639 672 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 GPR17Q13304 367 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 DYRK2Q92630 601 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 IGSF8Q969P0 613 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 POM121Q96HA1 1249 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 P2RY10O00398 339 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 BTG1P62324 171 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 SPANXN5Q5MJ07 72 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 WDR83Q9BRX9 315 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 FAAP24Q9BTP7 215 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 NAA50Q9GZZ1 169 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 PRAMEF25A6NGN4 478 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 PRAMEF5Q5TYX0 476 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 PRAMEF6Q5VXH4 476 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 UMODL1-AS1Q8N2C9 162 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 OR5V1Q9UGF6 321 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 GPR31O00270 319 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 GALR1P47211 349 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 RNF113BQ8IZP6 322 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 LHX4Q969G2 390 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 BOD1Q96IK1 185 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 CAPNS2Q96L46 248 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 MBOAT4Q96T53 435 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 MENTQ9BUN1 341 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 NTMT1Q9BV86 223 aa9.52□□□□□ -0.89
COL4A4-201ENST00000396625 NOSIPQ9Y314 301 aaKnown RBP9.52□□□□□ -0.89
COL4A4-201ENST00000396625 CCDC187A0A096LP49 1063 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms