RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 NPIPA3F8WFD2 350 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 GATBO75879 557 aaKnown RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 NCR1O76036 304 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 SERPINA3P01011 423 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 CDAP32320 146 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 TNFSF8P32971 234 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 MAGEB1P43366 347 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 SELENOPP49908 381 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 CCR9P51686 369 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 KCTD18Q6PI47 426 aaPredicted RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 DEGS2Q6QHC5 323 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 DCXRQ7Z4W1 244 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 FAM109AQ8N4B1 249 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 IL17RDQ8NFM7 739 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 PPP1R14AQ96A00 147 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 ZNF775Q96BV0 537 aaPredicted RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 ATF6BQ99941 703 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 C6orf62Q9GZU0 229 aaPredicted RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 KCNN2Q9H2S1 579 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 ZDHHC11Q9H8X9 412 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 IKZF2Q9UKS7 526 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 LIPGQ9Y5X9 500 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
CLIC1-209ENST00000395892 PTPRZ1P23471 2315 aaPredicted RBP11.88□□□□□ -0.51
CLIC1-209ENST00000395892 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 TAF4O00268 1085 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CASKO14936 926 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 GFRA3O60609 400 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 ZNF254O75437 659 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 ACTL6AO96019 429 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 YIF1BQ5BJH7 314 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 WDR38Q5JTN6 314 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 PDSS1Q5T2R2 415 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 FAM220AQ7Z4H9 259 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 SLC22A16Q86VW1 577 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 TPRA1Q86W33 373 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CATSPERDQ86XM0 798 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CROCCP3Q8IVE0 287 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 PHYHIPQ92561 330 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 ABTB1Q969K4 478 aaPredicted RBP11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CPNE4Q96A23 557 aaPredicted RBP11.87□□□□□ -0.51
CLIC1-209ENST00000395892 NABP1Q96AH0 204 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 WDFY2Q96P53 400 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 WDR12Q9GZL7 423 aaKnown RBP11.87□□□□□ -0.51
CLIC1-209ENST00000395892 DEFB127Q9H1M4 99 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 HMG20AQ9NP66 347 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 EMC7Q9NPA0 242 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 POLE4Q9NR33 117 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CRNNQ9UBG3 495 aaPredicted RBP11.87□□□□□ -0.51
CLIC1-209ENST00000395892 RCE1Q9Y256 329 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
CLIC1-209ENST00000395892 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 TRBV5-7A0A0A0MS05 114 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 A0A1W2PPK0 400 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 A0A1W2PPL8 197 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 ZNF879B4DU55 563 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 DHHO43323 396 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 WISP2O76076 250 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 SPINK2P20155 84 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 THBS2P35442 1172 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 PPP5CP53041 499 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 LSM6P62312 80 aaKnown RBP11.86□□□□□ -0.51
CLIC1-209ENST00000395892 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 IFITM3Q01628 133 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 MFGE8Q08431 387 aaPredicted RBP11.86□□□□□ -0.51
CLIC1-209ENST00000395892 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 FCRLAQ7L513 359 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 LINGO2Q7L985 606 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 OR5AK2Q8NH90 309 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 TMEM45BQ96B21 275 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 ZNF837Q96EG3 531 aaPredicted RBP11.86□□□□□ -0.51
CLIC1-209ENST00000395892 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 DERL3Q96Q80 235 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 OR14A2Q96R54 314 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 GFI1Q99684 422 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 MROQ9BYG7 248 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 SEC61A2Q9H9S3 476 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 PNRC2Q9NPJ4 139 aaKnown RBP11.86□□□□□ -0.51
CLIC1-209ENST00000395892 TIGARQ9NQ88 270 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 SPRR3Q9UBC9 169 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 GDF2Q9UK05 429 aaPredicted RBP11.86□□□□□ -0.51
CLIC1-209ENST00000395892 FBXL3Q9UKT7 428 aa11.86□□□□□ -0.51
CLIC1-209ENST00000395892 SLC22A13Q9Y226 551 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms