RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FBXL3Q9UKT7 428 aa7.54□□□□□ -1.2
ATG4A-205ENST00000394892 SPEF1Q9Y4P9 236 aa7.54□□□□□ -1.2
ATG4A-205ENST00000394892 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
ATG4A-205ENST00000394892 TEX13CA0A0J9YWL9 993 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 A0A1W2PPW3 197 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 PRSS37A4D1T9 235 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 CDC14BO60729 498 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 DEAF1O75398 565 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 LCKP06239 509 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 H1F0P07305 194 aaKnown RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 ACHEP22303 614 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 ANOS1P23352 680 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 SRP14P37108 136 aaKnown RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 ERFP50548 548 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 CHN2P52757 468 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 KLF3P57682 345 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 RPS23P62266 143 aaKnown RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 HSF2Q03933 536 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 TBC1D28Q2M2D7 210 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 RSPO1Q2MKA7 263 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 C12orf54Q6X4T0 127 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 C1orf229Q6ZS94 237 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 HDDC2Q7Z4H3 204 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 RFLNBQ8N5W9 214 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 OR1J1Q8NGS3 322 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 OR52J3Q8NH60 311 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 SLC25A40Q8TBP6 338 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 KLF14Q8TD94 323 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 SLC7A6Q92536 515 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 HPS1Q92902 700 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 TSSK2Q96PF2 358 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 RBP7Q96R05 134 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 GPX7Q96SL4 187 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 OR2J1Q9GZK6 312 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 ANKRD19PQ9H560 264 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 GORASP2Q9H8Y8 452 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 NRIP3Q9NQ35 241 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 VSX1Q9NZR4 365 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 FBXO9Q9UK97 447 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-205ENST00000394892 V9GYQ6 96 aa7.53□□□□□ -1.2
ATG4A-205ENST00000394892 IQCMA0A1B0GVH7 501 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 A0A1W2PPL8 197 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 GMNCA6NCL1 334 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 A6NIZ1 184 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 TXNDC12O95881 172 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 AVPP01185 164 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 IGHV1-46P01743 117 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 ERCC1P07992 297 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 HSD17B1P14061 328 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 RHCEP18577 417 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 MSR1P21757 451 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 CCNOP22674 350 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 APLNRP35414 380 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 RAD52P43351 418 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 GPR6P46095 362 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 TMEM33P57088 247 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 RAP1BP61224 184 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 PPP1CBP62140 327 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 RAP1AP62834 184 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 MRPS11P82912 194 aaKnown RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 PLP2Q04941 152 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 PSG7Q13046 419 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 ANKDD1AQ495B1 522 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 CCDC92Q53HC0 331 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 AVPI1Q5T686 147 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 MBNL2Q5VZF2 373 aaKnown RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 FAM205BPQ63HN1 556 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 Q6ZR03 302 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 VASH1Q7L8A9 365 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 ICA1LQ8NDH6 482 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 OR1J2Q8NGS2 313 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 C11orf40Q8WZ69 217 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 CMTM5Q96DZ9 223 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 RSRC1Q96IZ7 334 aaKnown RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 CDRT15Q96T59 188 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 BCL2L14Q9BZR8 327 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 NUAK2Q9H093 628 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 SYT4Q9H2B2 425 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 C1orf198Q9H425 327 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 CCNB1IP1Q9NPC3 277 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 SPAG4Q9NPE6 437 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 NKIRAS2Q9NYR9 191 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 ADA2Q9NZK5 511 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 STX18Q9P2W9 335 aaKnown RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 COA3Q9Y2R0 106 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-205ENST00000394892 STARD10Q9Y365 291 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 TIMM10BQ9Y5J6 103 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 IER3IP1Q9Y5U9 82 aa7.52□□□□□ -1.21
ATG4A-205ENST00000394892 IGLV1-36A0A0B4J1U3 117 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 OR6C6A6NF89 314 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 UNC119BA6NIH7 251 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ARPC2O15144 300 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PPIHO43447 177 aaKnown RBP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 SLC16A7O60669 478 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ENTPD5O75356 428 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 UBOX5O94941 541 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms