RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 THBS1P07996 1170 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 NME2P22392 152 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 MRPL19P49406 292 aaKnown RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 PGFP49763 221 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 RBP2P50120 134 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 GFERP55789 205 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 KCNJ8Q15842 424 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 GFRALQ6UXV0 394 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TCEAL2Q9H3H9 227 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TAS2R4Q9NYW5 299 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 SLC5A6Q9Y289 635 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 PUS1Q9Y606 427 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 CXCL10P02778 98 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 ACHEP22303 614 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 GLRA1P23415 457 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 NPY4RP50391 375 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 CLDN15P56746 228 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 DHRS4L2Q6PKH6 230 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 MAVSQ7Z434 540 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 OR2L13Q8N349 312 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 OR51E1Q8TCB6 317 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 SLAMF6Q96DU3 332 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 PDFQ9HBH1 243 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 SMCO4Q9NRQ5 59 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 MYO18AQ92614 2054 aaKnown RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 CALCBP10092 127 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 F2RP25116 425 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 RELAQ04206 551 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 HLA-BQ31612 363 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 OR5M11Q96RB7 305 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TAAR9Q96RI9 348 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 POLDIP2Q9Y2S7 368 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 F6UZH7 168 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 PPICP45877 212 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 RNF4P78317 190 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TRILQ7L0X0 811 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 CLDN22Q8N7P3 220 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 OR52N1Q8NH53 320 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 RHOXF1Q8NHV9 184 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 C3orf49Q96BT1 292 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 ISYNA1Q9NPH2 558 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 ZC3H12DA2A288 527 aaKnown RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SIRPB1O00241 398 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 DVL1O14640 695 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 HRO43593 1189 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CXCL13O43927 109 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PIPP12273 146 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 HOXD11P31277 338 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 DVL1P1P54792 670 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR51F2Q8NH61 342 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF75AQ96N20 296 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR11A1Q9GZK7 315 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SLCO5A1Q9H2Y9 848 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 POFUT1Q9H488 388 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SLC22A11Q9NSA0 550 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ANKRD12Q6UB98 2062 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 K7EQM0 130 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 LGALS8O00214 317 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 KLK10O43240 276 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 FABP1P07148 127 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 GPX2P18283 190 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CCR2P41597 374 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 USP51Q70EK9 711 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 KMT5CQ86Y97 462 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SIAH3Q8IW03 269 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PELI3Q8N2H9 469 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 KLK4Q9Y5K2 254 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 RPS10-NUDT3A0A1W2PQS6 291 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SLC22A20A6NK97 555 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ELK1P19419 428 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 RPS10P46783 165 aaKnown RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 HCCSP53701 268 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 AGBL4Q5VU57 503 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF626Q68DY1 528 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 LHFPL2Q6ZUX7 228 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 C1QTNF3Q9BXJ4 246 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ALS2Q96Q42 1657 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF195O14628 629 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CTSLP07711 333 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 FCRL6Q6DN72 434 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR8G2PQ6IF36 304 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ALKAL2Q6UX46 152 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 LINC01599Q8WXQ3 324 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OXGR1Q96P68 337 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 LYSMD1Q96S90 227 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ARV1Q9H2C2 271 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ACOXLQ9NUZ1 547 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 QPCTLQ9NXS2 382 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ASH2LQ9UBL3 628 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 EXO1Q9UQ84 846 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms