RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PAHP00439 452 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 SP1P08047 785 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 SELENOPP49908 381 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 HSD17B12Q53GQ0 312 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 TEX30Q5JUR7 227 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 ZNF454Q8N9F8 522 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 GFI1Q99684 422 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 MFRPQ9BY79 579 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 CYB5R1Q9UHQ9 305 aa16.91■□□□□ 0.3
CLDND1-203ENST00000394181 TRAV1-2A0A0B4J238 106 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 OR5H15A6NDH6 313 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 AQP8O94778 261 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 HRGP04196 525 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 ZNF12P17014 697 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 SRMP19623 302 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 KCTD18Q6PI47 426 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-203ENST00000394181 TPRA1Q86W33 373 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 TMEM251Q8N6I4 163 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 ZNF676Q8N7Q3 588 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 OR10S1Q8NGN2 331 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 CHPT1Q8WUD6 406 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 DTNBP1Q96EV8 351 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 SLC6A15Q9H2J7 730 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 ZNF552Q9H707 407 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-203ENST00000394181 CENPMQ9NSP4 180 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 MALT1Q9UDY8 824 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 LHFPL6Q9Y693 200 aa16.9■□□□□ 0.3
CLDND1-203ENST00000394181 PHF3Q92576 2039 aaKnown RBP16.9■□□□□ 0.3
CLDND1-203ENST00000394181 PTPRZ1P23471 2315 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-203ENST00000394181 ITGB2P05107 769 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 RAB3BP20337 219 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 PSMD7P51665 324 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 CAMK2BQ13554 666 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 PAMR1Q6UXH9 720 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 CFAP77Q6ZQR2 320 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 ESPNLQ6ZVH7 1005 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 EGFL6Q8IUX8 553 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 TMEM123Q8N131 208 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 DTX3Q8N9I9 347 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 IL17RDQ8NFM7 739 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 OR2V1Q8NHB1 315 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 TIGARQ9NQ88 270 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 GLTPQ9NZD2 209 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 UGT2A1Q9Y4X1 527 aa16.89■□□□□ 0.3
CLDND1-203ENST00000394181 FAM186AA6NE01 2351 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 NME2P1O60361 137 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 SRSF10O75494 262 aaKnown RBP16.89■□□□□ 0.29
CLDND1-203ENST00000394181 ARL6IP5O75915 188 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 ZNF432O94892 652 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 OCM2P0CE71 109 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 NME2P22392 152 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 CCL11P51671 97 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 RIDAP52758 137 aaKnown RBP16.89■□□□□ 0.29
CLDND1-203ENST00000394181 SRYQ05066 204 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 POU4F3Q15319 338 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 SLC25A25Q6KCM7 469 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 FDX2Q6P4F2 183 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 FAM131AQ6UXB0 335 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 OR10H5Q8NGA6 315 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 ZNF837Q96EG3 531 aaPredicted RBP16.89■□□□□ 0.29
CLDND1-203ENST00000394181 EMC9Q9Y3B6 208 aa16.89■□□□□ 0.29
CLDND1-203ENST00000394181 TRBV5-5A0A0J9YX44 114 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 FABP12A6NFH5 140 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 VAMP5O95183 116 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 HPNP05981 417 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 MEOX1P50221 254 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 BAK1Q16611 211 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 CNIH2Q6PI25 160 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 TRILQ7L0X0 811 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.88■□□□□ 0.29
CLDND1-203ENST00000394181 OR6N1Q8NGY5 312 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 A0A1B0GVC2 190 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 A6NIN4 97 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 ZNF716A6NP11 495 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 ATF1P18846 271 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 ELK1P19419 428 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 CSNK1A1P48729 337 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 PLGLB1Q02325 96 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 MRPL28Q13084 256 aaKnown RBP16.88■□□□□ 0.29
CLDND1-203ENST00000394181 Q499Y3 187 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 IGF2-ASQ6U949 168 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 RNF133Q8WVZ7 376 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 TMEM54Q969K7 222 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 SRRQ9GZT4 340 aa16.88■□□□□ 0.29
CLDND1-203ENST00000394181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLDND1-203ENST00000394181 TMEM212A6NML5 194 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 GLSO94925 669 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-203ENST00000394181 EPXP11678 715 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 LHX2P50458 406 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 PPP3R1P63098 170 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 OXA1LQ15070 435 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 ZNF181Q2M3W8 571 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 SLC22A16Q86VW1 577 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 CATSPERDQ86XM0 798 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 OR8H2Q8N162 312 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 FDCSPQ8NFU4 85 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 SLAMF6Q96DU3 332 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 BRD7Q9NPI1 651 aa16.87■□□□□ 0.29
CLDND1-203ENST00000394181 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms