RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 DCAF7P61962 342 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 SORDQ00796 357 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 METTL11BQ5VVY1 283 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 ZNF704Q6ZNC4 412 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 TDHQ8IZJ6 230 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 PAQR8Q8TEZ7 354 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 NPRL2Q8WTW4 380 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 TAAR8Q969N4 342 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 PHF7Q9BWX1 381 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 RPS10P5Q9NQ39 176 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 CGGBP1Q9UFW8 167 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 IGHV1OR15-9A0A0B4J2B8 117 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 A0A1B0GX78 115 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 C9J4A7 227 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 GPR171O14626 319 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 SCRG1O75711 98 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 HTR3BO95264 441 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 LPLP06858 475 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 PPP3CBP16298 524 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 CDK2P24941 298 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 POLR2HP52434 150 aaKnown RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 BTG1P62324 171 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 CDNFQ49AH0 187 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 H3F3CQ6NXT2 135 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 KCTD9Q7L273 389 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 STT3BQ8TCJ2 826 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 A6NCN8 305 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 G3V3Y1 287 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 CD63P08962 238 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 FOLR1P15328 257 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 GPR3P46089 330 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 LGALSLQ3ZCW2 172 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 RAET1LQ5VY80 246 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 LIX1LQ8IVB5 337 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 BEST3Q8N1M1 668 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 GTPBP8Q8N3Z3 284 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 ZNF775Q96BV0 537 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
CALD1-203ENST00000393118 PPP1R3EQ9H7J1 279 aa9.55□□□□□ -0.88
CALD1-203ENST00000393118 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TMEM212A6NML5 194 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 SIGLEC6O43699 453 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ITGA5P08648 1049 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 PTBP1P26599 531 aaKnown RBP eCLIP9.54□□□□□ -0.885e-7■■□□□ 12.8
CALD1-203ENST00000393118 POU3F4P49335 361 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ACY1Q03154 408 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ZNF117Q03924 483 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 BAMBIQ13145 260 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CAMK2DQ13557 499 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CEBPEQ15744 281 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TSSK4Q6SA08 328 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ZNF584Q8IVC4 421 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 OR5L2Q8NGL0 311 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TCEAL7Q9BRU2 100 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 C20orf85Q9H1P6 137 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 S1PR5Q9H228 398 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TMEM231Q9H6L2 316 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 LDAHQ9H6V9 325 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 MED29Q9NX70 200 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 C19orf25Q9UFG5 118 aaPredicted RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 NDRG3Q9UGV2 375 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 KIF25Q9UIL4 384 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 PTPRZ1P23471 2315 aaPredicted RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 C17orf51A8MQB3 221 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 SYT7O43581 403 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ADAM11O75078 769 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 IL33O95760 270 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TXNDC12O95881 172 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 RAB40ALP0C0E4 278 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ANXA7P20073 488 aaKnown RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 SLC2A5P22732 501 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 PEA15Q15121 130 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ZNF141Q15928 474 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 PRTGQ2VWP7 1150 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 FHL5Q5TD97 284 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 DMKNQ6E0U4 476 aaPredicted RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 STAC2Q6ZMT1 411 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 OVCH1Q7RTY7 1134 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ARIH2OSQ8N7S6 290 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ACBD4Q8NC06 268 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 NPEPL1Q8NDH3 523 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CD300LFQ8TDQ1 290 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 RAB40AQ8WXH6 277 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 ATOH1Q92858 354 aaPredicted RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 SLCO1C1Q9NYB5 712 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 HHLA2Q9UM44 414 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 SRPK3Q9UPE1 567 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 TANC1Q9C0D5 1861 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 C13orf42A0A1B0GVH6 325 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 A8MVM7 634 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 AIPO00170 330 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 IFNGR1P15260 489 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CD53P19397 219 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
CALD1-203ENST00000393118 OR1L3Q8NH93 324 aa9.54□□□□□ -0.88
CALD1-203ENST00000393118 CCDC107Q8WV48 283 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms