RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZCCHC3Q9NUD5 404 aaKnown RBP6.98□□□□□ -1.29
VTI1A-201ENST00000393077 DLEC1Q9Y238 1755 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 TRBV5-3A0A0A0MS03 114 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CDHR4A6H8M9 788 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 DHRS7CA6NNS2 312 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF727A8MUV8 499 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 MKRN2OSH3BPM6 223 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 GFYI3L273 518 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 TBX19O60806 448 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CLDN11O75508 207 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 OR2J2O76002 312 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ARAFP10398 606 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SRMP19623 302 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 HBA1P69905 142 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 GAGE1Q13065 139 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 DHRS2Q13268 280 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SLC17A1Q14916 467 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 HAGHQ16775 308 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 MED27Q6P2C8 311 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF813Q6ZN06 617 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 OVCH1Q7RTY7 1134 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ANGPTL5Q86XS5 388 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PRR18Q8N4B5 295 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 METTL27Q8N6F8 245 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF709Q8N972 641 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CYB561A3Q8NBI2 242 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 FAM3CQ92520 227 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 EDAQ92838 391 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF385AQ96PM9 386 aaKnown RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 GPR174Q9BXC1 333 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 MED20Q9H944 212 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 OR52A1Q9UKL2 312 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CCDC88CQ9P219 2028 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 XRCC3O43542 346 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SRPX2O60687 465 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 RPS13P62277 151 aaKnown RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SCAPQ12770 1279 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 DCAF10Q5QP82 559 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 GFI1BQ5VTD9 330 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PRAMEF8Q5VWM4 474 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PRAMEF7Q5VXH5 474 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 FAM83HQ6ZRV2 1179 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ARHGAP12Q8IWW6 846 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 NRMQ8IXM6 262 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 GCNT2Q8N0V5 402 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF664Q8N3J9 261 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SFXN5Q8TD22 340 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PPP1R16AQ96I34 528 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 TBX15Q96SF7 602 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 G6PC3Q9BUM1 346 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 BET1LQ9NYM9 111 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SLC7A11Q9UPY5 501 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 LAMP3Q9UQV4 416 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 YIPF1Q9Y548 306 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PTPRFP10586 1907 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 A0A1W2PRU2 124 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ANTXRLA6NF34 631 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 IFITM5A6NNB3 132 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF724A8MTY0 619 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CLDN34H7C241 214 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SCDO00767 359 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 IGSF6O95976 241 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SEMG1P04279 462 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 C8AP07357 584 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 LAMP2P13473 410 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF28P17035 718 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 TYRP1P17643 537 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 MAPK8P45983 427 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 YBEYP58557 167 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 MC1RQ01726 317 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CD200R1LQ6Q8B3 271 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ALKAL1Q6UXT8 129 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.97□□□□□ -1.29
VTI1A-201ENST00000393077 PAQR9Q6ZVX9 377 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 RNF44Q7L0R7 432 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF429Q86V71 674 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 SLC26A10Q8NG04 563 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 ROBO4Q8WZ75 1007 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 CCDC3Q9BQI4 270 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 KCNE5Q9UJ90 142 aa6.97□□□□□ -1.29
VTI1A-201ENST00000393077 C9J4A7 227 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 RAB27BO00194 218 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 PAPLNO95428 1278 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 GPANK1O95872 356 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 HLA-DQA2P01906 255 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 PGA3P0DJD8 388 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 TFPIP10646 304 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 SLC25A4P12235 298 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 HSD3B2P26439 372 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 TIA1P31483 386 aaKnown RBP eCLIP6.96□□□□□ -1.29
VTI1A-201ENST00000393077 CSNK1DP48730 415 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 RAB28P51157 221 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 CDK3Q00526 305 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 NAAAQ02083 359 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 TAF9Q16594 264 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 DNLZQ5SXM8 178 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms