RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 NYNRINQ9P2P1 1898 aaKnown RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 A0A0J9YY10 115 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 TMEM218A2RU14 115 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 UMAD1C9J7I0 102 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 RAD51DO75771 328 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 GLSO94925 669 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 HMGN3Q15651 99 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 TGM7Q96PF1 710 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 EXOSC3Q9NQT5 275 aaKnown RBP12.99□□□□□ -0.33
RTF1-201ENST00000389629 FAM230AA0A1W2PPH8 454 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 TACR3P29371 465 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 MARCH3Q86UD3 253 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 STPG2Q8N412 459 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 MARCH1Q8TCQ1 289 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 HDAC8Q9BY41 377 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 ZNF442Q9H7R0 627 aa12.99□□□□□ -0.33
RTF1-201ENST00000389629 OR2C1O95371 312 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 CRYBA1P05813 215 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 NTSR1P30989 418 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 DHRS2Q13268 280 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 FAM78AQ5JUQ0 283 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
RTF1-201ENST00000389629 OR14A16Q8NHC5 309 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 FGF13Q92913 245 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 FGF22Q9HCT0 170 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 ACAD8Q9UKU7 415 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 ANKRD20A5PA0PJZ0 165 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 TMEM184AQ6ZMB5 413 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 GLRX5Q86SX6 157 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 STACQ99469 402 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 KCNJ15Q99712 375 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 FBXO34Q9NWN3 711 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
RTF1-201ENST00000389629 PDCD11Q14690 1871 aaKnown RBP12.98□□□□□ -0.33
RTF1-201ENST00000389629 OR2T1O43869 369 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 RUNX2Q13950 521 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 C19orf48Q6RUI8 117 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 KCNK15Q9H427 330 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 UBQLN4Q9NRR5 601 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 MRPS18AQ9NVS2 196 aaKnown RBP12.98□□□□□ -0.33
RTF1-201ENST00000389629 MTFP1Q9UDX5 166 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 TBC1D29Q9UFV1 150 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 PLXNA1Q9UIW2 1896 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 SHISA3A0PJX4 238 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 HRH1P35367 487 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 HOXA1P49639 335 aaPredicted RBP12.98□□□□□ -0.33
RTF1-201ENST00000389629 EMDP50402 254 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 TLE3Q04726 772 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 TMEM151BQ8IW70 566 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 TMEM234Q8WY98 164 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
RTF1-201ENST00000389629 F5H5K5 113 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 RNASEK-C17orf49H0YIS7 233 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 LRP3O75074 770 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 GLULP15104 373 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 CPN1P15169 458 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 UQCC3Q6UW78 93 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 FBXO17Q96EF6 278 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 MRGPRX3Q96LB0 322 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 SYT3Q9BQG1 590 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 BANF2Q9H503 90 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 MIOXQ9UGB7 285 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 MFSD2BA6NFX1 497 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 SDCBPO00560 298 aaPredicted RBP12.97□□□□□ -0.33
RTF1-201ENST00000389629 GJA4P35212 333 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 FRZBQ92765 325 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 TMEM59Q9BXS4 323 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 KIAA0100Q14667 2235 aaKnown RBP12.97□□□□□ -0.33
RTF1-201ENST00000389629 ZNF85Q03923 595 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 C4orf17Q53FE4 359 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 TANGO2Q6ICL3 276 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 BEND4Q6ZU67 534 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 MCATQ8IVS2 390 aaKnown RBP12.97□□□□□ -0.33
RTF1-201ENST00000389629 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 OR2G2Q8NGZ5 317 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 PPP4R1LQ9P1A2 415 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
RTF1-201ENST00000389629 NAGAP17050 411 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms