RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 OR4K13Q8NH42 304 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 NABP1Q96AH0 204 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 SLCO4A1Q96BD0 722 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 FOXN4Q96NZ1 517 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 TRAF4Q9BUZ4 470 aaPredicted RBP8□□□□□ -1.13
HMGN1-202ENST00000380747 SYT4Q9H2B2 425 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 MMADHCQ9H3L0 296 aaPredicted RBP8□□□□□ -1.13
HMGN1-202ENST00000380747 EGLN3Q9H6Z9 239 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 TBC1D23Q9NUY8 699 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 PDP1Q9P0J1 537 aaPredicted RBP8□□□□□ -1.13
HMGN1-202ENST00000380747 DNAJB9Q9UBS3 223 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 FBXL3Q9UKT7 428 aa8□□□□□ -1.13
HMGN1-202ENST00000380747 RTTNQ86VV8 2226 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 IQCMA0A1B0GVH7 501 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 KIAA1324LA8MWY0 1029 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 EBAG9O00559 213 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 ARPC3O15145 178 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TMCC2O75069 709 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 KHDRBS3O75525 346 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TIPRLO75663 272 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 SOX14O95416 240 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TXNDC12O95881 172 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CD8AP01732 235 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 SERPINA5P05154 406 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 IGFBP1P08833 259 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 HIST1H1CP16403 213 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CTLA4P16410 223 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 MSR1P21757 451 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 LAP3P28838 519 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CDKN2AP42771 156 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 ATP5J2P56134 94 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 GALK2Q01415 458 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 HGFACQ04756 655 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 PLP2Q04941 152 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 SNTB2Q13425 540 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 GK3PQ14409 553 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 Q5PR19 223 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 FAM27BQ5VT28 67 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 KRT80Q6KB66 452 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 RPL13AP3Q6NVV1 102 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 LEG1Q6P5S2 330 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 UGT2A3Q6UWM9 527 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 RASSF6Q6ZTQ3 369 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 FOXL2NBQ6ZUU3 175 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 PTCHD4Q6ZW05 846 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 Q71RC1 249 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TMEM179BQ7Z7N9 219 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 DTX2Q86UW9 622 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 LRRC75A-AS1Q8N1F1 130 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 PAPD5Q8NDF8 572 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 SLC30A7Q8NEW0 376 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 IGFBPL1Q8WX77 278 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 FBXO17Q96EF6 278 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 COX4I2Q96KJ9 171 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 ZNF75AQ96N20 296 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 NMNAT3Q96T66 252 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 FEVQ99581 238 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 TSSK6Q9BXA6 273 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 DGCR6LQ9BY27 220 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 NUAK2Q9H093 628 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CDH20Q9HBT6 801 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 EMC7Q9NPA0 242 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 POLE4Q9NR33 117 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CA10Q9NS85 328 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 ARMC1Q9NVT9 282 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 VSX1Q9NZR4 365 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 COA3Q9Y2R0 106 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-202ENST00000380747 SPEF1Q9Y4P9 236 aa7.99□□□□□ -1.13
HMGN1-202ENST00000380747 RAI1Q7Z5J4 1906 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-202ENST00000380747 C12orf71A8MTZ7 269 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 VSTM5A8MXK1 200 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 OVOL3O00110 214 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 IDH3BO43837 385 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 MGRN1O60291 552 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 MPZL1O95297 269 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 PTHP01270 115 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 PF4P02776 101 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 SCG5P05408 212 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 CST2P09228 141 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 MMP7P09237 267 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-202ENST00000380747 CCL2P13500 99 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 ZNF35P13682 527 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 ZNF32P17041 273 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 PRKACGP22612 351 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 CCNOP22674 350 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 APEX1P27695 318 aaKnown RBP7.98□□□□□ -1.13
HMGN1-202ENST00000380747 CRABP1P29762 137 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 THBS4P35443 961 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 SERPINF1P36955 418 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 ARHGDIAP52565 204 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.98□□□□□ -1.13
HMGN1-202ENST00000380747 CCNIQ14094 377 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 DAG1Q14118 895 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 ENDOGQ14249 297 aaKnown RBP7.98□□□□□ -1.13
HMGN1-202ENST00000380747 TBC1D28Q2M2D7 210 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 PABPC1L2AQ5JQF8 200 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 OTPQ5XKR4 325 aa7.98□□□□□ -1.13
HMGN1-202ENST00000380747 DNM1P34Q6PK57 102 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms