RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZNF793Q6ZN11 406 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 CPEB2Q7Z5Q1 589 aaKnown RBP13.71□□□□□ -0.22
NPHP4-201ENST00000378156 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 SLC25A21Q9BQT8 299 aaPredicted RBP13.71□□□□□ -0.22
NPHP4-201ENST00000378156 ACKR4Q9NPB9 350 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 A0A0U1RQK1 487 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 PRAMEF4O60810 478 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ACTL6BO94805 426 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 NME1P15531 152 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 MAGEB1P43366 347 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 GPR3P46089 330 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 CCL11P51671 97 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 FLI1Q01543 452 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 PRAMEF9Q5VWM5 478 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 MIB2Q96AX9 1013 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 METTL9Q9H1A3 318 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 OR6C76A6NM76 312 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 HRO43593 1189 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 STK17BO94768 372 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ATP1B1P05026 303 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 TNFSF4P23510 183 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 YIF1BQ5BJH7 314 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 LPCAT3Q6P1A2 487 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF547Q8IVP9 402 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 NRTNQ99748 197 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 M6PRP20645 277 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF808Q8N4W9 903 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 MAFAQ8NHW3 353 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 APH1BQ8WW43 257 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 LAT2Q9GZY6 243 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 GCM1Q9NP62 436 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 C1orf123Q9NWV4 160 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 EHFQ9NZC4 300 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 WNT16Q9UBV4 365 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 COA3Q9Y2R0 106 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 PMS2P2O95744 297 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ABHD16AO95870 558 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 OR10A3P58181 314 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 TLE4Q04727 773 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 ACSM1Q08AH1 577 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 TNK1Q13470 666 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 GPR155Q7Z3F1 870 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 MFSD4AQ8N468 514 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 CADM4Q8NFZ8 388 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 OR4D6Q8NGJ1 314 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 RAB39BQ96DA2 213 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 TMEM43Q9BTV4 400 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 TMEM59Q9BXS4 323 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 SRRQ9GZT4 340 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 GNG13Q9P2W3 67 aa13.7□□□□□ -0.22
NPHP4-201ENST00000378156 MRPS2Q9Y399 296 aaKnown RBP13.7□□□□□ -0.22
NPHP4-201ENST00000378156 STMND1H3BQB6 276 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 P2RY10O00398 339 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 MSTNO14793 375 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 PPP1R2P9O14990 202 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ITGB2P05107 769 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 FCGR2AP12318 317 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 TGM1P22735 817 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ARSJQ5FYB0 599 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 KIAA0907Q7Z7F0 614 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ABHD5Q8WTS1 349 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 RBMXL1Q96E39 390 aaKnown RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 EMC6Q9BV81 110 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 FGF20Q9NP95 211 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 NRG2O14511 850 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 PIAS2O75928 621 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 RAB4AP20338 218 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 EVX1P49640 407 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 MFGE8Q08431 387 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 SELENBP1Q13228 472 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF684Q5T5D7 378 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 FCRL6Q6DN72 434 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 DCXRQ7Z4W1 244 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 CCDC190Q86UF4 302 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ADGRF3Q8IZF5 1079 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 OCSTAMPQ9BR26 566 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 NINQ8N4C6 2090 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 SERTM1A2A2V5 107 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 VAMP5O95183 116 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 FAM27D1Q5T7N8 215 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 PLPP5Q8NEB5 264 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 GJC3Q8NFK1 279 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 OR56B1Q8NGI3 324 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 GPR160Q9UJ42 338 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms