RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 MRPS33Q9Y291 106 aaKnown RBP12.5□□□□□ -0.41
SF1-205ENST00000377394 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 ASAH2BP0C7U1 165 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 PNMTP11086 282 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
SF1-205ENST00000377394 SDHAP31040 664 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 RABIFP47224 123 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 SOX2P48431 317 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 TAS2R20P59543 309 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
SF1-205ENST00000377394 HYAL4Q2M3T9 481 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 ALG10Q5BKT4 473 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 OR51S1Q8NGJ8 323 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
SF1-205ENST00000377394 ACOT7O00154 380 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 TXNDC12O95881 172 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 F13BP05160 661 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 ECH1Q13011 328 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 SKP2Q13309 424 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 C1orf61Q13536 156 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 C9orf152Q5JTZ5 239 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 ARMC6Q6NXE6 501 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 UNQ6126/PRO20091Q6UXV3 157 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 C10orf53Q8N6V4 93 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
SF1-205ENST00000377394 CCDC74AQ96AQ1 378 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 WDR77Q9BQA1 342 aaPredicted RBP12.49□□□□□ -0.41
SF1-205ENST00000377394 SRA1Q9HD15 236 aaKnown RBP12.49□□□□□ -0.41
SF1-205ENST00000377394 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 FADS1O60427 444 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 S100A6P06703 90 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 RNF224P0DH78 156 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 CD96P40200 585 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 PPT1P50897 306 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 UQCC3Q6UW78 93 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 ETV3LQ6ZN32 361 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 MED25Q71SY5 747 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 LPAR4Q99677 370 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 KLHDC3Q9BQ90 382 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
SF1-205ENST00000377394 SPTBP11277 2137 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TCRBV21S2A2A0A5A6 115 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 BLACEA4D250 179 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 C5orf52A6NGY3 159 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 OR4C45A6NMZ5 311 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 H7C1C5 153 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 CLDN4O14493 209 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 SEMA4FO95754 770 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 GABRG2P18507 467 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 LCN6P62502 163 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 DMWDQ09019 674 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 SMCO1Q147U7 214 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 MESTQ5EB52 335 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 ARL5BQ96KC2 179 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TREM1Q9NP99 234 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 FAM96BQ9Y3D0 163 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 COLCA2A8K830 154 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 CCSO14618 274 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 GLSO94925 669 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 FARS2O95363 451 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 NSA2O95478 260 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 S100PP25815 95 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 AKR1C3P42330 323 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 MRPS21P82921 87 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 FZD2Q14332 565 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 OR10AC1Q8NH08 325 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TSPAN32Q96QS1 320 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 TMEM184BQ9Y519 407 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 SPTY2D1-AS1A0A0U1RR47 76 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 PRAMEF26H0Y7S4 382 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 LY86O95711 162 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 S100A8P05109 93 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 KLK3P07288 261 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 ITPKBP27987 946 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 CCR4P51679 360 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 TAF13Q15543 124 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 EIF2S3LQ2VIR3 472 aaKnown RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 TMPRSS12Q86WS5 348 aa12.48□□□□□ -0.41
SF1-205ENST00000377394 METTL27Q8N6F8 245 aaPredicted RBP12.48□□□□□ -0.41
SF1-205ENST00000377394 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms