RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 STEAP3Q658P3 488 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 SLC25A25Q6KCM7 469 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 SLC25A47Q6Q0C1 308 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 LINC00299Q6ZSB3 139 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 KCTD20Q7Z5Y7 419 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 OR10S1Q8NGN2 331 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 C4orf45Q96LM5 186 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 B3GNT4Q9C0J1 378 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 EIF1BO60739 113 aaKnown RBP11.17□□□□□ -0.62
CLCN6-206ENST00000376496 OCM2P0CE71 109 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 CD53P19397 219 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 FKBP2P26885 142 aaKnown RBP11.17□□□□□ -0.62
CLCN6-206ENST00000376496 RAC3P60763 192 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 OR2V1Q8NHB1 315 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 ADGRG7Q96K78 797 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 NAA11Q9BSU3 229 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-206ENST00000376496 SIAEQ9HAT2 523 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 ASH2LQ9UBL3 628 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 LHFPL6Q9Y693 200 aa11.17□□□□□ -0.62
CLCN6-206ENST00000376496 RER1O15258 196 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 IGHV3-9P01782 118 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 UCHL1P09936 223 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 GALP22466 123 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 BLVRAP53004 296 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CLN3Q13286 438 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 TRAM1Q15629 374 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF239Q16600 458 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 DDI2Q5TDH0 399 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 LRRC18Q8N456 261 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 KCNE4Q8WWG9 221 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 DERL3Q96Q80 235 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 GFI1Q99684 422 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RBM24Q9BX46 236 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 GLTPQ9NZD2 209 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CEP295Q9C0D2 2601 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 GJE1A6NN92 205 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 NME2P1O60361 137 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 SLC2A1P11166 492 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RAB3BP20337 219 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 NME2P22392 152 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 THBS2P35442 1172 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 AGFG1P52594 562 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RIDAP52758 137 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CLDN12P56749 244 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 PPIAP62937 165 aaKnown RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RGS21Q2M5E4 152 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CEP78Q5JTW2 689 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 ESPNLQ6ZVH7 1005 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 OR5H6Q8NGV6 325 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 RNF128Q8TEB7 428 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 ABTB1Q969K4 478 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-206ENST00000376496 SLAMF6Q96DU3 332 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 MNTQ99583 582 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 UGT2A1Q9Y4X1 527 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 FREM1Q5H8C1 2179 aa11.16□□□□□ -0.62
CLCN6-206ENST00000376496 TRAV8-7A0A075B6U6 113 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 CENPBD1B2RD01 187 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 TAF4O00268 1085 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 LMX1BO60663 402 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 UPK1BO75841 260 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 SERPINA3P01011 423 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ATF1P18846 271 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 CAPZA2P47755 286 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF45Q02386 682 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ROM1Q03395 351 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 P2RY14Q15391 338 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 BAK1Q16611 211 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 HES5Q5TA89 166 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-206ENST00000376496 LYSMD2Q8IV50 215 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 TMEM123Q8N131 208 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ASB17Q8WXJ9 295 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 SH3GL3Q99963 347 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 B4GALT7Q9UBV7 327 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 CYB5R1Q9UHQ9 305 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 GDF2Q9UK05 429 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-206ENST00000376496 DMXL2Q8TDJ6 3036 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 CACNA1GO43497 2377 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF716A6NP11 495 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 PHYHO14832 338 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 GPRIN2O60269 458 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ELK1P19419 428 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 SRMP19623 302 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
CLCN6-206ENST00000376496 LHX2P50458 406 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 PRKXP51817 358 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 HIST3H3Q16695 136 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms