RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 RAB5BP61020 215 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 RPL27P61353 136 aaKnown RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 EGR3Q06889 387 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 HFEQ30201 348 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 MESTQ5EB52 335 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 PABPC1L2AQ5JQF8 200 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 PHF19Q5T6S3 580 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 TMEM205Q6UW68 189 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 UNQ9370/PRO34162Q6UXP9 181 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 RPS4Y2Q8TD47 263 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 CPNE4Q96A23 557 aaPredicted RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 SLC25A36Q96CQ1 311 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 LRRC46Q96FV0 321 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 ALX4Q9H161 411 aaPredicted RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 WDR76Q9H967 626 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 CYSLTR2Q9NS75 346 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 TAS2R5Q9NYW4 299 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 TRBV11-1A0A0K0K1C0 115 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 RPS10-NUDT3A0A1W2PQS6 291 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 DXOO77932 396 aaKnown RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 IGHMP01871 453 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 NPR2P20594 1047 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 MAPK3P27361 379 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 SSTR2P30874 369 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 GNG10P50151 68 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 DLX5P56178 289 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 AARDQ4LEZ3 155 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 HACD4Q5VWC8 232 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 LSRQ86X29 649 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 CDC20BQ86Y33 519 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 DEFB123Q8N688 67 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZNRF4Q8WWF5 429 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 THRSPQ92748 146 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 TXNIPQ9H3M7 391 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 WDR54Q9H977 334 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 PPP4R1LQ9P1A2 415 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 RASD1Q9Y272 281 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 KCNK7Q9Y2U2 307 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 DNASE2O00115 360 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 ITGA10O75578 1167 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 TIAF1O95411 115 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 SYPP08247 313 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 CBR1P16152 277 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ELK1P19419 428 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 CCKBRP32239 447 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 KCNJ3P48549 501 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZNF684Q5T5D7 378 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 BAIAP2L2Q6UXY1 529 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 SPAG16Q8N0X2 631 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZNF511Q8NB15 262 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 NLGN4YQ8NFZ3 816 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 MAFAQ8NHW3 353 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 HGDQ93099 445 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZNF524Q96C55 264 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 TMEM41AQ96HV5 264 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 INTS14Q96SY0 518 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 MRI1Q9BV20 369 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 TTTY10Q9BZA0 68 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 NKX6-2Q9C056 277 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 C11orf54Q9H0W9 315 aaPredicted RBP7.4□□□□□ -1.22
UBR4-202ENST00000375224 NCOR1P1Q9H4R4 102 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 PTTG3PQ9NZH4 202 aa7.4□□□□□ -1.22
UBR4-202ENST00000375224 FAM74A7A6NL05 159 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 IGHV2-70P01814 119 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 GRPRP30550 384 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 FBXW4P57775 412 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 SIGLEC14Q08ET2 396 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 SF3A2Q15428 464 aaKnown RBP7.4□□□□□ -1.23
UBR4-202ENST00000375224 FAM74A3Q4VXF1 159 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 SAMD12Q8N8I0 201 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 TRMT10AQ8TBZ6 339 aaKnown RBP7.4□□□□□ -1.23
UBR4-202ENST00000375224 ASB17Q8WXJ9 295 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 DDIT4LQ96D03 193 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 SPSB2Q99619 263 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 CMSS1Q9BQ75 279 aaKnown RBP7.4□□□□□ -1.23
UBR4-202ENST00000375224 SLITRK2Q9H156 845 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.23
UBR4-202ENST00000375224 A0A0G2JK05 382 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 PRSS37A4D1T9 235 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 A6NIZ1 184 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 C11orf98E9PRG8 122 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 PLPP3O14495 311 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 DVL2O14641 736 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 ZNF208O43345 1280 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 NDUFB7P17568 137 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 AHCYP23526 432 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 THBS2P35442 1172 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 MAP2K3P46734 347 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 RAP1BP61224 184 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 RAP1AP62834 184 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 PITPNAQ00169 270 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 ZP4Q12836 540 aa7.39□□□□□ -1.23
UBR4-202ENST00000375224 SNTB1Q13884 538 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms